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LevSeq-1.3.1

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@YuemingLong YuemingLong released this 20 Jan 18:54
· 45 commits to main since this release

New Features & Updates
Error Handling Enhancements:

The process now saves partial results to the output in case of an error, ensuring minimal data loss.
A reference CSV file is also saved to maintain detailed information about the process.
Basecalling Improvements:

All basecalled reads are now stored, providing a comprehensive dataset for future reference and analysis.
Variant Calling Enhancements:

Updated the variant calling code to include:
Insertions
Deletions
Benefits:
Improved reliability and traceability in case of process interruptions.
Enhanced variant detection capabilities, offering broader analysis insights.
Better record-keeping for reproducibility and future reviews.