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FiberBrowser 3.0.1

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@mtcicero26 mtcicero26 released this 17 Oct 02:23

FiberBrowser 3.0.1 bundles FiberHMM 3.0.2 and requires
fiberhmm[consensus]>=3.0.2,<4.

Fixed

  • The guided tour starts on first launch. After declining the offer to
    restore a session (or on a first launch with no genome downloaded), the tour
    could stop at its first step with "load a BAM or BigBed with Open". The tour
    tab no longer loads a start-up genome of its own, so it no longer waits for
    the main window's genome download; it opens the demo at once, without a
    reference sequence if the demo's genome is still downloading. If the demo
    cannot be opened, the tour asks again and then says why it can't start.
  • DddA QC grades against a somatic DddA control. FiberHMM 3.0.2 replaces
    the DddA reference that fiberhmm-qc compares samples with: the packaged
    one came from a sperm DAF-seq sample, so normal DddA libraries failed the
    signal-rate and periodicity grades. Re-run Data quality (QC) on DddA
    datasets; QC reports made with earlier versions graded DddA against the
    wrong control. Footprint calls, DddB and Hia5 grades are unchanged.

Downloads

  • Mac (Apple silicon, macOS 14+): FiberBrowser-3.0.1-arm64.dmg (signed and notarized)
  • Windows 10/11: FiberBrowser-3.0.1-Setup.exe, or FiberBrowser-3.0.1-windows-portable.zip
  • Python: pip install fiberbrowser==3.0.1

Checksums are in SHA256SUMS.txt. Installing over 3.0.0 keeps your settings, saved sessions and Library.