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FiberHMM v1.1

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@mtcicero26 mtcicero26 released this 27 Aug 17:00
· 205 commits to main since this release
v1.1
a03519c
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Learn about vigilant mode.

Made major changes to apply_model:

  • Now reads the input bed in chunks and writes processed reads as tempfiles to minimize memory usage.
  • Simplified the processing of the reads into the bed12 format, significantly speeding up the script.

Added a parallelized version of apply_model:

  • Linearly increases speed based on number of CPU cores.
  • Has some stability issues with high CPU counts.
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