v1.5.0-beta.3: chore: bump version to 1.5.0-beta.3 and update dependencies

Version Updates:
- Bump version from 1.5.0-beta.2 to 1.5.0-beta.3
- Update @types/node from 24.0.6 to 24.0.7
- Update @octokit/plugin-paginate-rest to 13.1.1
- Refresh pnpm-lock.yaml with updated dependency versions

This release includes all recent security and stability fixes:
- Critical security vulnerabilities eliminated
- Proper log level configuration
- Enhanced error handling and resource management
- Working batch processing with performance optimizations

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>