v5.1.0 [2026-01]

Design

• new logos in HTML reports
• new graphic charter
• replace Highcharts with Echarts
• modernize the JavaScript libraries used to build HTML reports

Tools//options renammed

• denoising becomes reads_processing
• cluster_stats becomes cluster_asv_report
• affiliation_stats becomes affiliation_report
• The frogsfunc tools options have been updated to be more consistent.

Functions added

• remove_chimera.py : implement a chimera_denovo algorithm for long reads.

Bugs fixed

• denoising.py: For long reads, remove --revcomp option in cutadapt command line for 3' primer removal
• cluster_filters.py : fix bug while interpreting minmin-abundance as decimal value
• affiliation_filter.py : correct behavior when using multiple taxon to ignore or keep