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glyenzy 0.8.0

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@fubin1999 fubin1999 released this 29 Jul 17:25

New features

  • Biosynthesis functions now return typed glyenzy_biosynthesis_network objects that preserve their igraph interface and support collision-aware plot() and ggplot2::autoplot() layered DAG layouts with glycan nodes and labeled concrete or virtual enzyme edges. (#35, #36)
  • trace_biosynthesis() and trace_biosynthesis_virtual() now mark target glycans with a logical target vertex attribute; autoplot() highlights them by default in multi-target networks, with explicit control through highlight_target. (#37, #38)