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glyexp 0.15.0

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@fubin1999 fubin1999 released this 10 Jul 04:18

New features

  • Add experimental GlycomicSE and GlycoproteomicSE SummarizedExperiment subclasses, plus coercion and predicate helpers for recommended glycomics and glycoproteomics containers. (#18)

Minor improvements and bug fixes

  • as_pseudo_glycome() now accepts a GlycoproteomicSE object and returns a GlycomicSE object. (#19)
  • as_se() now uses "abundance" instead of "counts" as the default SummarizedExperiment assay name. (#17)
  • glycan_type validation now accepts "O", "HMO", "GSL", "GAG", and "GPI". (#20)
  • summarize_experiment() now supports GlycomicSE and GlycoproteomicSE objects. (#19)