glymotif 0.16.0

Breaking changes

• db_motifs() no longer returns a character vector of motif names. It now returns a db_motifs_spec object that should be passed directly to the motifs argument of have_motifs(), count_motifs(), match_motifs(), add_motifs_lgl(), and add_motifs_int(). Specifying alignments, ignore_linkages, strict_sub, or match_degree is no longer valid. (#35)
• get_motif_structure(), get_motif_alignment(), and is_known_motif() are deprecated. Use db_motif_info() to inspect database motifs instead. (#35)
• get_motif_aglycon() are removed. (#32)

New features

• Add db_motif_info() to return a tibble of all built-in database motifs, including their names, structures, and alignments. (#35)
• Expand the built-in motif database to include additional GlycoMotif collections. Now there are 904 unique motifs. (#36)

Minor improvements and bug fixes

• Warn on mismatched motif structure levels in matching. (#38)
• Unknown GGM motif names now trigger an error with suggestions for similar known motif names. (#39)