glysmith 0.12.0

Breaking changes

• step_preprocess() no longer has a qc_name argument, no longer passes qc_name to glyclean::auto_clean(), and no longer removes QC samples after preprocessing. (#20)

Minor improvements and bug fixes

• Fix the bug that step_sig_boxplot() sometimes failed to generate boxplots. (#21)
• inquire_blueprint() no longer asks users about QC sample names. (#20)
• inquire_blueprint() now defaults to ANOVA or t-test for glycomics DEA analysis, instead of limma. (8d8ece4)
• Fix the incorrect retry message in inquire_blueprint() when the LLM fails to generate a blueprint. (44a271c)
• AI prompts for inquire_blueprint() are removed from the function documentations. (#19)