v3.0.2 release

• Improved sensitivity and precision for long-read assembly use cases (-L and --mix).
  • Ida Shinder (@ishinder) contributed these improvements and fixes, including a feature that uses unaligned poly(A) tails to better anchor transcript ends.
• Addressed a rare regression where very complex splice graphs in long-read bundles with high error rates prevented StringTie from completing the assembly of those bundles.
• Addressed a long-standing issue where -e (expression estimation) did not always report all transcripts provided via -G when they did not overlap any reads (i.e., no coverage), which impacted downstream analyses using the prepDE script.
• Added a self-contained source package to the release (stringtie-*.offline.tar.gz), which includes test data and can be used to compile StringTie and run the included tests on systems without internet access.
• Added support for the Clang/LLVM C++ compiler toolchain on Linux.