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Nematode_v0.2.2

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@h-xuanjiu h-xuanjiu released this 02 Apr 07:24
· 6 commits to main since this release

Nematode 0.2.2 (2026-03-18)

DATA UPDATES

  • Updated nematode.info: Refreshed taxonomic and functional traits dataset (2,484 --> 2524 genera) from Nemaplex.UCDavis.edu (Revision Date: 03/18/2026).

  • Updated nematode.ave.mass: Refreshed genus and family average body mass dataset (987 --> 1094 entries) from Nemaplex.UCDavis.edu (Revision Date: 03/18/2026).

BUG FIXES

  • Fixed various minor issues and improved overall stability.

Nematode 0.2.1 (2025-09-07)

BUG FIXES

  • Formula correction in SRI calculation:
    • Fixed formula error in cal.SRI() affecting Species Richness Index (SRI) calculation
    • Fixed related error in Ecological.Indices() function
    • Impact: Incorrect formula produced erroneous SRI values
    • Upgrade to latest version required for correct calculations

Nematode 0.2.0 (2025-08-20)

NEW FEATURES

  • Added function cal.TD: Trophic Diversity
  • Added function cal.H: Shannon-Wiener Index
  • Added function cal.J: Pielou's Evenness Index
  • Added function cal.Simpson: Simpson Index
  • Added function cal.WI: Wasilewska Index
  • Added function cal.MI: Maturity Index
  • Added function cal.PPI: Plant Parasite Index
  • Added function cal.SRI: Species Richness Index
  • Added function cal.NCR: Nematode Channel Ratio
  • Added function cal.CI: Channel Index
  • Added function cal.BI: Basic Index
  • Added function cal.EI: Enrichment Index
  • Added function cal.SI: Structure Index
  • Added function Ecological.Indices
  • Added function NMF
  • Added function NEF
  • Added function check_nematode_genus
  • Added function diet_rel_abundance
  • Added function fuzzy_genus_match
  • Added function num_species
  • Added function rel_abundance
  • Added function runNMDS
  • Added function runPCoA
  • Added function runSimper