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{EGAnet} 2.0.7

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@AlexChristensen AlexChristensen released this 02 Sep 17:17

Changes in version 2.0.7

  • FIX: mixed data with missing data in network.predictability

  • ADD: frobenius norm to compare networks

  • ADD: network.compare function to test for differences in network structures using three different metrics (Frobenius Norm, Jensen-Shannon Similarity, total network strength)

  • ADD: a general function called information to compute several information theory measures

  • UPDATE: default 'loading.method' for net.loads has been changed to "revised" moving forward -- the previous default in versions <= 2.0.6 can be obtained using "original"

  • UPDATE: invariance handles more than 2 groups (plots up to 4 groups pairwise)

  • UPDATE: added 'signed' argument in jsd to allow for signed or absolute networks to be used in computations (includes downstream functions: infoCluster)

  • UPDATE: NEWS is now formatted in markdown

  • UPDATE: network.predictability uses R-squared and mean absolute error (MAE) for all node predictions

  • INTERNAL: network.generalizabilty was moved to be internal (needs some work yet)

  • INTERNAL: signs for net.loads uses the first eigenvector of the target network (rather than the custom obtain_signs function)