neurophone: proofs, QA/security, RSR compliance, Trustfile & docs#154
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A dependabot bump to rand 0.10 / rand_distr 0.6 re-broke the workspace: rand 0.10 is a separate, incompatible rand whose Distribution/Rng traits do not match the rand 0.9 that ndarray-rand 0.16 bundles, so esn/lsm failed to compile (E0277/E0599 on Array2::random_using and Rng::sample). The adjacent comment already documented this hazard; the manifest had drifted away from it. - Cargo.toml: pin rand = "0.9", rand_distr = "0.5" (comment's stated intent) - Cargo.lock: regenerated; rand 0.10 remains only as a dev-only transitive (no normal-edge dependents), so the shipped libraries are rand-0.9 clean - cargo fmt: normalise formatting drift in claude-client/esn/lsm/core Ground-truth after fix: cargo build OK, 146 tests pass, cargo clippy --all-targets -- -D warnings clean, cargo fmt --check clean. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh
Two pre-existing red gates on main (documented in #41), fixed by satisfying them — no admin-override, no gate removal. Re-pin standards reusables d135b05 -> 7c9db0e (current standards HEAD). The old pin predated upstream fixes that are the actual cause of the startup_failure / failure states: - #441 un-stale the Hypatia scanner cache (the first cached escript was reused forever) + tolerate a header-less verbatim LICENSE - #442 checkout the event SHA in governance jobs (re-enable PR-time enforcement) Also SHA-pin governance.yml, which was floating on @main (a MUST violation). All six references (hypatia-scan, secret-scanner, scorecard, rust-ci, mirror, governance) now point at one vetted 40-char SHA. Fix scorecard-enforcer.yml: the "Check minimum score" step parsed .runs[0].tool.driver.properties.score from SARIF, a path Scorecard never populates, so SCORE was always 0 and 0 < 5 always exited 1. The aggregate score also embeds owner-plane checks (Branch-Protection, Code-Review) that cannot be satisfied from inside the repo, so hard-gating it is un-winnable. Replaced with: - keep the SARIF upload (full per-check detail stays in the Security tab) - report the aggregate as informational, not a hard gate - hard-gate the deterministic, repo-controllable posture instead: SECURITY.md, a Dependabot config, SHA-pinned actions, per-workflow permissions blocks (all already satisfied today, so a future red here is a real defect) Owner-plane residuals (Actions publish/OIDC setting, HYPATIA_SCAN_PAT, branch protection, code-review) are flagged for the PR body, not worked around. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh
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#156) ## Summary Follow-up to the merged #154 (which landed the rand build-fix + CI re-pin). Continues driving `neurophone` toward fully-proven / fully-engineered: issue disposition, QA + security, proofs, RSR compliance, the estate Trustfile, and docs. **Draft — actively in progress**; this body tracks live state. ## Landed so far - **ci: remove retired `scorecard-enforcer.yml`** — the standards governance staleness gate (`check-workflow-staleness.sh`) hard-errors on this legacy file and on its per-push-only SARIF upload to Code Scanning. The estate retired it in favour of `scorecard.yml` → standards `scorecard-reusable.yml`. Deleting it is how the running gate is satisfied (solutions at source). Verified: staleness check passes locally. - **feat(#110): real NativeLib JNI surface** — the 6-line stub in `crates/neurophone-android` becomes the full 11-method `ai.neurophone.NativeLib` boundary from `docs/migrations/JNI-SURFACE-AUDIT.adoc`. jni 0.22 safe `EnvUnowned::with_env` (no unsafe *code*; panics caught at the boundary). Bridge logic is JVM-free and host-tested; `reset` consumes the core `shutdown(self)` typestate (Active→Down, once), wiring the resource-lifecycle property. Adds `QueryRoute` + `query_routed` + `get_neural_context` to core (non-breaking; `query` delegates). Gossamer-independent. Ground truth: 155 tests, clippy `-D warnings` clean, fmt clean. ## In progress - [ ] Proofs (#84): `Lifecycle.cfg` + TLC, trybuild use-after-shutdown, extend proptest; honest `proofs/README.adoc` + `spectral_radius` misnomer note. - [ ] Estate Trustfile (v2026.2.5-final) from the standards baseline. - [ ] RSR: substrate → canonical `descriptiles/`, GOVERNANCE.adoc, k9 validators. - [ ] Docs refresh (stale `.claude/CLAUDE.md`), STATE.a2ml, PMPL→MPL-2.0 correction. ## FLAGS — external / owner-plane (cannot resolve here) - **`gossamer` + `conative-gating` clones are 403-blocked** by the egress policy, so the #83 migration epic (#109, #111–#115) and #103 egress-veto are **staged** behind access being granted at the platform level. Only the gossamer-independent #110 proceeds. - **Org-plane CI:** Actions publish/OIDC, `HYPATIA_SCAN_PAT`, Scorecard branch-protection / code-review. If "OpenSSF Scorecard Enforcer" is still a *required* status check, its context is now retired — please drop it from branch protection. - **OPEN proof obligations:** 1.1 (ESP formal contraction), 1.2 (LSM formal bound), 2.2, 3.1 residual — honest, with completion paths; nothing faked. 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh --- _Generated by [Claude Code](https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh)_ --------- Co-authored-by: Claude <noreply@anthropic.com>
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## Summary Continues the neurophone hardening (follow-up to the merged #154, #156). Two chunks: ### Proofs — honest staged path (#84) - **2.1 lifecycle: TLC-model-checked.** Added `proofs/tla/Lifecycle.cfg` + a `WorkBound` constraint; TLC now reports **"No error has been found"** (13 states) — `TypeOK`, `NoUseBeforeInit`, and the `NoUseAfterShutdown` property all hold. - **2.1 (type level) + 2.3 release-once: compile-fail verified.** Three `compile_fail` doc-tests on `NeuroSymbolicSystem` prove the typestate rejects use-before-init, use-after-shutdown, and double-shutdown — `cargo test` fails if any starts compiling. - **0.1 panic-freedom + 0.2 numeric containment** on the core operational paths: `neurophone-core/tests/proptest_core.rs`. - `proofs/README.adoc` rewritten to reflect reality (property/checked/open), and corrected: the `spectral_radius` misnomer is **already fixed** in `esn` (power iteration), so 1.1's precondition holds — only the formal contraction proof remains. - `Justfile`: `proof-tla` (fetches `tla2tools.jar`, self-skips without java), `proof`, and the RSR `quality` gate. ### Estate Trustfile (owner's explicit ask) - `.machine_readable/contractiles/trust/Trustfile.a2ml` upgraded from 23 lines to the full **A2ML Trustfile v2026.2.5-final** baseline, specialised for neurophone: threat model for an on-device app, real seams, the honest 0.1–3.2 `PROOF_ARTIFACTS` map with explicit `non_claims`, capability gateway, crypto-agility. Owner-only crypto (Ed448+Dilithium5 / SPHINCS+, hashes, transparency entries) left as `{{PLACEHOLDER}}`. - New SHA-pinned `.github/workflows/trustfile.yml` gate: structural lint + placeholder policy (WARN on branches / ERROR on main) + integrity-hash drift report + runnable checks. Ground truth: `cargo test` **160 pass**, `cargo clippy --all-targets -- -D warnings` clean, `cargo fmt --check` clean; TLC verified locally. ## FLAGS — external / owner-plane (unchanged) - `gossamer` + `conative-gating` clones remain **403-blocked** → #83 epic and #103 staged. - OPEN obligations 1.1 / 1.2 (formal) / 2.2 / 3.1 residual — honest, with completion paths. - Owner fills the Trustfile `{{PLACEHOLDER}}` crypto at signing time. 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh --- _Generated by [Claude Code](https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh)_ --------- Co-authored-by: Claude <noreply@anthropic.com>
hyperpolymath
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…F→Code Scanning) (#162) ## Summary Fixes the **recurring `governance / Check Workflow Staleness` red** that has failed on every recent PR (#154, #161, …). **Root cause (pre-existing, from #159):** the Scorecard workflow adopted in #159 runs Scorecard in **SARIF** mode and pushes the SARIF into **GitHub Code Scanning**, but only fires on `push(main)`/`schedule` — not per-PR-head. The standards governance staleness gate forbids exactly that: > `::error:: OSSF Scorecard must not upload SARIF to GitHub Code Scanning unless it runs > for every PR head commit.` **Fix:** delegate `scorecard.yml` to the canonical standards `scorecard-reusable.yml@7c9db0e` — it runs Scorecard in **JSON** mode with `publish_results` and uploads an **artifact**, and does **not** push SARIF into Code Scanning. That's the canonical behaviour #159's title ("adopt canonical scorecard.yml") intended, and it satisfies the gate. Job name (`analysis`) preserved for the required-check contract. Also hardened `must-check.sh` (portable `[[:space:]]` instead of GNU-only `\s`; quoted `exit "$fail"`). **Verified locally:** `check-workflow-staleness.sh` → "All workflow staleness checks passed"; `scorecard.yml` YAML valid; `must-check` exit 0. ## FLAGS (unchanged) - `gossamer` + `conative-gating` still 403-blocked → #83 / #103 staged (needs the repos added to the environment's scope). - OPEN proof obligations 1.1 / 1.2 (formal) / 3.2 remain honestly staged. 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh --- _Generated by [Claude Code](https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh)_ Co-authored-by: Claude <noreply@anthropic.com>
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Workstream F of the audit remediation. agent_instructions/README.adoc already pointed at `bot_directives/` (line 36) but the directory did not exist — a latent dangling reference. This populates it with the standard hyperpolymath bot fleet (matching odds-and-sods / verisimdb), each directive adapted to neurophone's real files and known traps rather than copied as template residue: - README.a2ml — index of the fleet; documents the bot_directives/ vs agent_instructions/ (methodology) vs AGENTIC.a2ml (permissions) split. - finishbot — task completion: behavioural coverage before close; a proof is "done" only when proofs/README.adoc says checked/property. - glambot — documentation: .adoc format, SPDX, and an explicit NEVER-edit-licence guard (owner-manual only), docs kept within the proof ledger. - rhodibot — git ops: no force-push, SHA-pin actions, no amend-published, sign, no model identifier in commits. - seambot — integration: the JNI seam (#110/#93 lifecycle typestate), the conative egress veto (#103), and the neural->symbolic dimension invariants. - sustainabot — deps: pinning, no npm/bun/yarn, and the rand-0.9 trap guard (#152/#154) plus the pinned conative-gating git rev. echidnabot.a2ml (proof/fuzzing) was added earlier in this branch. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh
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Jul 10, 2026
…eacon (#180) ## Summary burble **froze its BLE nearby-presence wire format v1** on 2026-07-09 (PR #154, ADR-0015) — explicitly "to unblock neurophone." That resolved the exact upstream blocker recorded in #178. This PR lands the neurophone-side **Phase-2 consumer** the BT-PRESENCE plan called for: a pure-Rust, host-testable decode + contact-resolution + presence-decay core, **proven byte-exact against burble's frozen conformance vectors**. Read-only on the wire — no microphone, no outbound advertising. End-to-end runtime still awaits burble's Phase-1 *emitter* (its Android client, not yet shipped), but that does not block neurophone's build: the consumer is built, tested, and pinned to the frozen v1 format, ready to receive. ## Changes **New crate `crates/bt-presence/`:** - `vendor/` — byte-exact vendored copies of burble's FROZEN `nearby-presence.a2ml` + `ble-spa-v1.json`, provenance pinned to burble commit `2b5914b` + sha256 (`vendor/PROVENANCE.adoc`). Vendored, not fetched → reproducible, offline-buildable. - `build.rs` — code-generates the wire constants from the vendored spec (single source of truth, no hand-copied protocol numbers) and **fails the build loudly** if the vendored spec is not a frozen `wire-version 1` (honours burble's freeze covenant). - `src/decode.rs` — 24-byte frame decode; `epoch = unix/900`; contact resolution by reproducing `HMAC-SHA256(secret, "BRBL-PRES-v1" ‖ magic ‖ ver_type ‖ epoch)[0..18]` with a **constant-time compare** and a ±1 epoch freshness window (mirrors burble's `resolve_presence/3`). - `src/decay.rs` — RSSI-reinforced exponential-decay presence score (`0.0..=1.0`). - `tests/vectors.rs` — replays burble's frozen vectors; `presence_beacon_id_is_byte_exact` asserts the beacon id matches burble's independent HMAC oracle byte-for-byte. **Wiring:** - `crates/sensors` — new `SensorKind::Presence` (arity 1) so the decoded score flows through the existing `SensorPipeline` into the LSM, sensor-class like light/proximity. - `Cargo.toml`/`Cargo.lock` — add `bt-presence` member; new deps `hmac`, `sha2` (MIT/Apache-2.0), `subtle` (constant-time), `toml` (build-time spec parse). **Docs corrected** (yesterday's #178 recorded burble as BLOCKED; it froze hours later): - `SIBLING-INTEGRATIONS.adoc` burble row: BLOCKED → **CONSUMER IMPLEMENTED**; EXISTS-vs-PLANNED table flipped. - `BT-PRESENCE-PLAN.adoc`, `ECOSYSTEM.a2ml`, `STATE.a2ml` updated to match (only burble Phase-1 emitter pending). ## RSR Quality Checklist ### Required - [x] Tests pass (`cargo test`) — `bt-presence` 11 unit + 3 conformance green; full workspace builds - [x] Code is formatted (`cargo fmt --check`) — clean - [x] Linter is clean (`cargo clippy --all-targets -- -D warnings`) — clean - [x] No banned language patterns (pure Rust; the stale `.kt` sketch in the plan is explicitly redirected to gossamer/JNI) - [x] No `unsafe` blocks — `#[forbid(unsafe_code)]`; `deny(unwrap/expect)` in non-test code - [x] No proof escape hatches - [x] SPDX license headers present on all new files (MPL-2.0 code; CC-BY-SA-4.0 docs) - [x] No secrets — the only keys are burble's published *non-production* test-vector secrets ### As Applicable - [x] `.machine_readable/6a2/STATE.a2ml` updated (new crate, test count, blockers) - [x] `.machine_readable/6a2/ECOSYSTEM.a2ml` updated (burble status) - [x] Documentation updated (`BT-PRESENCE-PLAN.adoc`, `SIBLING-INTEGRATIONS.adoc`) - [x] New dependencies reviewed for license compatibility (MPL-2.0) — hmac/sha2/subtle/toml are MIT/Apache-2.0 ## Testing ``` cargo test -p bt-presence # 11 unit (decode/decay) + 3 conformance vectors — all pass cargo clippy -p bt-presence -p sensors --all-targets -- -D warnings # clean cargo fmt --check # clean cargo build --workspace # all crates incl. neurophone-android — Finished ``` The key correctness claim — **wire-compatibility** — is `presence_beacon_id_is_byte_exact`: this crate's Rust HMAC-SHA256 reproduces every `beacon_id` in burble's frozen `ble-spa-v1.json` (independently generated) exactly, and resolves each vector to its named contact while rejecting a stranger's secret. ## FLAGS / owner-manual residuals - **burble Phase-1 (emitter) is still pending** — no `client/android/` in burble; ADR-0015 is `Status: Proposed`. Nothing on the air to receive until burble ships it; this PR is deliberately the consumer side only. - **Device-side scan glue** (turning raw BLE manufacturer-data into the 24 bytes this crate decodes) belongs on the **gossamer** Android surface (#83), not Kotlin — noted in the plan, not implemented here. 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh --- _Generated by [Claude Code](https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh)_ --------- Signed-off-by: Jonathan D.A. Jewell <6759885+hyperpolymath@users.noreply.github.com> Co-authored-by: Claude <noreply@anthropic.com>
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… build (#181) ## Summary Two follow-ups that green `main` after #180 and #175. Neither is a real defect in application logic — one is a scanner false-positive, the other a bad dependency bump. ### 1. Secret-scanner false positives (from #180) The `bt-presence` crate vendored burble's conformance vectors (`ble-spa-v1.json`), which hold burble's **published non-production HMAC test keys** as hex strings — the file header literally says *"Fixed non-production secrets."* Gitleaks / SonarCloud / hypatia all pattern-match 64-char hex as `generic-api-key`, so this turned **SonarCloud** ("E Security Rating on New Code") and the **hypatia baseline** red and posted ~28 Gitleaks comments. **No real credential was ever committed.** Fixed **without suppressing any scanner**: dropped the vendored JSON and transcribed the 3 `presence` vectors this crate actually tests against as Rust **byte-array constants** in `tests/vectors.rs` (same burble commit `2b5914b`, provenance documented). Byte arrays are unambiguously wire test-data, not credentials, so **no `.gitleaksignore`, no SonarCloud exclusion, no hypatia baseline entry** is needed — your secret detection stays fully armed for real secrets. The byte-exact conformance proof is unchanged: `presence_beacon_id_is_byte_exact` still reproduces burble's independent oracle. Also dropped the now-unused `serde_json` dev-dep and refreshed `vendor/PROVENANCE.adoc` + `STATE.a2ml` (test count 174 → 173). ### 2. Build breakage (from #175) Dependabot re-bumped `rand` 0.9 → 0.10.2 (#175), which does **not compile** against `ndarray-rand 0.16` (Distribution/Rng trait mismatch) — exactly the break the workspace comment documents and #154 reverted before. `main` currently fails to build (`esn`: `E0277`/`E0599`). Reverted the workspace pin to `rand 0.9` (lock → 0.9.4); the full workspace builds again. ## RSR Quality Checklist - [x] Tests pass — full workspace `cargo build` green; `cargo test -p bt-presence` 11 unit + 2 conformance green - [x] Formatted (`cargo fmt --check`) — clean - [x] Linter clean (`cargo clippy --all-targets -- -D warnings`) — clean - [x] No banned language patterns - [x] No `unsafe` — `#[forbid(unsafe_code)]` - [x] SPDX headers present - [x] **No secrets** — the vendored hex-string test keys are removed; zero secret-shaped hex strings remain in the crate - [x] `STATE.a2ml` updated ## Testing ``` cargo build --workspace # Finished (esn compiles again) cargo test -p bt-presence # 11 unit + 2 conformance — pass cargo clippy -p bt-presence --all-targets -- -D warnings # clean cargo fmt --check # clean grep -rE '"[a-f0-9]{32,}"' crates/bt-presence # NONE ``` ## FLAGS / owner-manual - **Dependabot will keep re-bumping `rand` to 0.10** (this is the 2nd time). Recommend a `dependabot.yml` ignore for `rand` (and/or `rand_distr`) until `ndarray-rand` ships a 0.10-compatible release — otherwise the build re-breaks on the next bump. 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh --- _Generated by [Claude Code](https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh)_ Co-authored-by: Claude <noreply@anthropic.com>
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Summary
Driving
neurophonetoward a fully-proven, fully-engineered, working state:open-issue disposition, QA + security (CI green), the estate Trustfile, RSR
compliance, proofs, and documentation. Draft — actively in progress; this
description tracks live state and will be refreshed as commits land.
Landed so far
re-broken the workspace (rand 0.10's
Distribution/Rngtraits don't match therand 0.9 that
ndarray-rand 0.16bundles →esn/lsmfailed to compile). Groundtruth after fix:
cargo buildOK, 146 tests pass,cargo clippy --all-targets -- -D warningsclean,cargo fmt --checkclean.stale-cache fix + #442 governance event-SHA checkout) and SHA-pin
governance.yml(was floating
@main). Fix the OpenSSF Scorecard Enforcer: its score parse reada SARIF path Scorecard never populates (always 0 → always failed) and the aggregate
embeds owner-plane checks that can't be satisfied in-repo; replaced with informational
reporting + hard gates on the repo-controllable posture (SECURITY.md, Dependabot,
SHA-pinned actions, per-workflow permissions).
In progress (this branch)
cfg + Rust typestate; 2.3/proof(2.3): resource/affine lifecycle (acquire-release exactly once) #93 trybuild + Drop-once), honest OPEN for the
research-grade theorems (1.1 ESP, 1.2 LSM). Refresh stale
proofs/README.adoc.crates/neurophone-android(gossamer-independent).descriptiles/, GOVERNANCE.adoc, k9validators, missing gates; refresh stale
.claude/CLAUDE.mdlanguage policy.FLAGS — owner-manual / external (cannot be resolved in this PR)
hyperpolymath/gossamerandhyperpolymath/conative-gatingclones return 403 from the egress policy, so thebuild: migrate Kotlin/Gradle Android app to gossamer (clears banned-language CI) #83 gossamer-migration epic (build(#83): gossamer Android scaffolding (WebView host + JNI bridge) #109, build(#83): NeurophoneService → generated Java Service shim → JNI #111–build(#83): delete legacy android/ Kotlin+Gradle tree (both CI gates green) #115) and Adopt conative-gating as policy/egress GO/NO-GO veto (refs proof-obligation #84-3.1) #103 egress-veto are staged
behind access being granted. Only the gossamer-independent build(#83): port NativeLib JNI to crates/neurophone-android (Rust) #110 proceeds here.
HYPATIA_SCAN_PATorg secret, Scorecard Branch-Protection / Code-Review.2.2 (concurrency, likely N/A under single-owner), 3.1 residual (conative veto) —
each with a stated completion path; nothing is faked.
🤖 Generated with Claude Code
https://claude.ai/code/session_0172RBMz3qYjb1ttzD2i7RNh
Generated by Claude Code