fix(resolution): scope call-graph updates by layer (#437)

[jafreck]

Fixes #437

Appended layerFilter (AND layer = 'overlay' when overlayOnly is true) to the two bulk UPDATE statements in resolveByContainment that were previously missing it.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 89.57%. Comparing base (086424e) to head (85804ce).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main     #397   +/-   ##
=======================================
  Coverage   89.57%   89.57%           
=======================================
  Files          80       80           
  Lines        9608     9608           
  Branches     2979     2979           
=======================================
  Hits         8606     8606           
  Misses       1002     1002           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
• 📦 JS Bundle Analysis: Save yourself from yourself by tracking and limiting bundle sizes in JS merges.