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docs(oatp): formalize the +BSA PSu,inf deferral (data-blocked) after closing the auto-ECM xfail#104

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docs/oatp-bsa-deferral
Jul 7, 2026
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docs(oatp): formalize the +BSA PSu,inf deferral (data-blocked) after closing the auto-ECM xfail#104
jam-sudo merged 1 commit into
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docs/oatp-bsa-deferral

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@jam-sudo jam-sudo commented Jul 7, 2026

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What

Formalizes the OATP1B1 ECM "+BSA PSu,inf" thread as a closed, documented decision.

Findings (3-agent investigation of the diagnosis §9 lever)

Changes (tracked)

(Local-only docs/_internal/status.md and the re-anchor spec were updated in the working tree to match; both are gitignored.)

Headline 2.743 untouched. This is the third correctness-not-accuracy finding this cycle (after RBP honest-1.0 and the prospective re-score).

…closing the auto-ECM xfail

A 3-agent investigation of the diagnosis section 9 '+BSA / PSu,inf OATP' lever
found the re-anchor already shipped (#66: abundance 5.0e5->1.3e5 onto non-holdout
pitavastatin) and the lever headline-inert (DE-44). #103 closed the last loose end
(test_predict_auto_ecm) via a stack-robust fold-error gate.

The remaining +BSA PS reparameterization is now formally deferred: the per-substrate
PSu,inf(+BSA)/Kp values are in the paywalled Li/Benet 2020 primary source (not to be
fabricated), and it is near-zero-observable (the abundance re-anchor absorbs the PS
change; pravastatin is validation-only) on top of headline-inert. Records this in the
DE-44 status line and a 2026-07-06 experiment-log entry so it is a closed, documented
decision rather than a dangling TODO.
@jam-sudo jam-sudo enabled auto-merge (squash) July 7, 2026 00:00

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Comment on lines +29 to +34
- **+BSA PSu,inf formally deferred (DE-44):** the mechanistic upgrade (replace `hepatic_ecm.json`
seed PS midpoints with Li/Benet 2020 +BSA-derived PSu,inf, then re-derive abundance) is
**data-blocked** — the per-substrate PSu,inf/Kp values are in the paywalled AAPS J primary source
([DOI](https://doi.org/10.1208/s12248-020-00528-y)), not to be fabricated — and near-zero-observable
(the abundance re-anchor absorbs the PS change; only *relative* statin shifts; pravastatin is
validation-only) on top of headline-inert. Deferred until the primary-source table is available.

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P2 Badge Update the roadmap diagnosis when deferring the lever

This new entry formally defers the diagnosis §9 +BSA/OATP lever, but docs/research/diagnosis.md:101 still tells readers it is “the one un-foreclosed accuracy lever” and maps it to the FLUX-1 statin re-anchor. For anyone starting from the diagnosis/README roadmap after this commit, the project still presents the deferred, data-blocked work as active and actionable, so please update that section to match the DE-44 deferral status.

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@jam-sudo jam-sudo merged commit 19ec01a into main Jul 7, 2026
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