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feat(batch): restore orchestrated batch.load (#822) - #823

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822-restore-batch-load-orchestrator
Aug 2, 2026
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feat(batch): restore orchestrated batch.load (#822)#823
jepegit merged 1 commit into
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822-restore-batch-load-orchestrator

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@jepegit

@jepegit jepegit commented Aug 2, 2026

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Summary

  • Extend cellpy.batch.load with v1 notebook orchestration (journal autoload → update → persist .cellpy + journal)
  • utils.batch.load forwards into the orchestrator; save_cellpy=False / journal_dir= / force_* → LoadPolicy mapping
  • Fix _LegacyExperimentAdapter summary farms for Batch.plot
  • Tests + design note for cwd journal default

Closes #822

Test plan

  • uv run pytest tests/test_batch.py::test_resolve_policy_force_flags_and_conflict (+ related load tests)
  • uv run pytest tests/test_batch.py -m essential
  • Dogfood: batch.load(name, project) from a notebook folder with FQDN rawdatadir

Made with Cursor

Extend cellpy.batch.load to autoload journals, update cells, drop bad
cells, and persist .cellpy + journal by default. Keep utils.batch as a
thin forwarder; map legacy force_* flags onto LoadPolicy.

Co-authored-by: Cursor <cursoragent@cursor.com>
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@jepegit
jepegit enabled auto-merge (squash) August 2, 2026 19:53
@jepegit
jepegit merged commit 855fb07 into master Aug 2, 2026
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@jepegit
jepegit deleted the 822-restore-batch-load-orchestrator branch August 2, 2026 19:54
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Restore orchestrated batch.load (v1 flow on v3)

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