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v0.10.0

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@jmgs7 jmgs7 released this 21 Aug 18:30
· 12 commits to main since this release
v0.10.0
e6a158e

SCutils v0.10.0

🚀 New features.

New functions:

  • VariableFeaturePlot2(): An enhanced version of Seurat's VariableFeaturePlot() that allows for labeling the top variable features on the plot. It also includes additional customization options for the plot aesthetics.

New internal functions:

  • FilterVariableFeatures(): Filters the high variable features of a Seurat object after applying Seurat::FindVariableFeatures() to delete low-informative genes such as mitochondrial, ribosomal, antisense and non-coding genes.
  • SelectPCs(): Estimates the intrinsic dimensionality of a Seurat object based on the PCA embeddings and returns a vector with the most informative PCs.

🛠️ Bug fixes and improvements.

  • CalculateQC() now automatically uses the default assay if assay = NULL.
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