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@jmgs7 jmgs7 released this 15 Jul 21:41
· 31 commits to main since this release
v0.8.5-beta
57b60df

SCutils v0.8.5-beta

🛠️ Bug fixes and improvements

  • FeatureDensityPlot() now sorts plots alphabetically by group as FeatureScatterGradient() does, ensuring consistent ordering of plots across different visualizations.
  • Now we apply coord_cartesian() instead of scale_x_continuous() and scale_y_continuous() in these functions to avoid issues with axis limits when using common.scales = TRUE. This change ensures that the axes are consistent across all plots without losing any data points or changing the density plot kernels.
  • We have updated the percent.plat metric calculation in CalculateQC(). Now it calculates the percentage of counts matching the following platelet-specific genes: PPBP, PF4, GP9, ITGA2B, TUBB1, ITGB3, and GP1BA. This addition allows for better identification of platelet contamination in single-cell RNA-seq data.

🏷️ Release tag

  • GitHub prerelease tag/title: v0.8.5-beta.

NOTE: This is a beta release, so some features may still be under development or need further testing. We encourage users to test the new features and provide feedback. Please report any issues or bugs encountered during testing to help us improve the package.

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