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@jspector792 jspector792 released this 29 Apr 16:39

pyVDERM v0.2.0

Updates pyVDERM to support 2D diffusion mapping

Features

  • Implements core VDERM algorithm in 2D
  • Implements tracking and visualization for 2D deforms
  • Supports 4 installation options to manage dependencies (default/lite, 2D, 3D, and all)

Installation (all dependencies)

pip install pyVDERM[all]

Documentation

See README and example notebooks in the examples/ directory.

Citation

Based on Choi & Rycroft (2020, https://link.springer.com/article/10.1007/s10915-021-01411-4) and Gastner & Newman (2004, https://www.pnas.org/doi/10.1073/pnas.0400280101)