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Releases: jspector792/diffusion-cartogram

v0.2.0 - Flatlands

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@jspector792 jspector792 released this 29 Apr 16:39

pyVDERM v0.2.0

Updates pyVDERM to support 2D diffusion mapping

Features

  • Implements core VDERM algorithm in 2D
  • Implements tracking and visualization for 2D deforms
  • Supports 4 installation options to manage dependencies (default/lite, 2D, 3D, and all)

Installation (all dependencies)

pip install pyVDERM[all]

Documentation

See README and example notebooks in the examples/ directory.

Citation

Based on Choi & Rycroft (2020, https://link.springer.com/article/10.1007/s10915-021-01411-4) and Gastner & Newman (2004, https://www.pnas.org/doi/10.1073/pnas.0400280101)

v0.1.5 - Initial release

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@jspector792 jspector792 released this 10 Feb 16:26

pyVDERM v0.1.5

First public release of pyVDERM - a Python implementation of the Volumetric Density-Equalizing Reference Map algorithm.

Features

  • Core VDERM deformation algorithm
  • Flexible XYZ file I/O (auto-detects format)
  • Optional mesh support via PyMeshLab
  • Comprehensive visualization tools
  • Tracking with intermediate exports
  • ParaView export capabilities

Installation

pip install pyVDERM[mesh]

Documentation

See README and example notebooks in the examples/ directory.

Citation

Based on Choi & Rycroft (2020): https://link.springer.com/article/10.1007/s10915-021-01411-4