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Interactive Documentation State 8.2
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The data on dates of symptoms of pairs of infector/infected individuals to be used to estimate the serial interval distribution.
Choose a .csv file to upload from your computer containing serial interval data. Please click here for a description of what your file should contain.
If your file has headers (i.e. the first row is not raw data), ensure you tick the header option.
An optional integer used as a seed for the random number generator at the start of the function. Useful to get reproducible results.
Once you've filled in all your inputs as described above, click "Next" in the app, and also click here to move to the next page of the interactive documentation.
The authors request users to cite the original publication when referencing EpiEstim App, the format or results generated from it.
Thompson RN, Stockwin JE, van Gaalen RD, Polonsky JA, et al. Improved inference of time-varying reproduction numbers during infectious disease outbreaks. Epidemics (2019).