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refactor(knowledge): publish retrieval adapter contracts - #266

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kl3inIT merged 6 commits into
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refactor/modulith-retrieval-adapter-boundaries
Aug 2, 2026
Merged

refactor(knowledge): publish retrieval adapter contracts#266
kl3inIT merged 6 commits into
mainfrom
refactor/modulith-retrieval-adapter-boundaries

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@kl3inIT

@kl3inIT kl3inIT commented Aug 2, 2026

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Summary

  • replace API/Worker injection of Retrieval concrete classes with seven intentional interfaces
  • keep full evidence-scope resolution internal and expose only bounded single-Asset inspection
  • make default/JDBC implementations package-private and add exact API/Worker dependency-surface guards
  • retain Worker opt-in search integration through the explicit canonical engine configuration

Verification

  • failing-first Retrieval adapter interface guard
  • Core/API/Worker main and test compilation
  • focused Retrieval engine/content/scope/registry, Modulith, API, and Worker integration suites
  • full Core/API/Worker tests: 142 test classes, zero failures
  • terminating clean test: 108 tasks, passed
  • python scripts/check_docs.py: 506 Markdown files, 8 mirrored pairs
  • pnpm release:check: 41 tests on Node 24.15.0
  • 41 changed paths; no migration, empty file, or external Retrieval implementation import

skip-release: intermediate modular refactor; release follows completion of the full refactor goal

Summary by CodeRabbit

  • New Features

    • Improved secure hybrid and GraphRAG retrieval with authorization checks, evidence validation, citation handling, auditing, and resilient result processing.
    • Added support for opening verified source and citation content.
    • Added embedding-profile resolution and organization-scoped profile lookup.
    • Added configurable retrieval adapters for API and background processing.
  • Documentation

    • Updated retrieval architecture documentation to clarify adapter contracts and module boundaries.
  • Tests

    • Added architecture checks to verify approved retrieval boundaries and implementation visibility.

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⚙️ Run configuration

Configuration used: Path: .coderabbit.yaml

Review profile: ASSERTIVE

Plan: Pro Plus

Run ID: 8b310876-4a49-4996-9c07-855b9b7627fd

📥 Commits

Reviewing files that changed from the base of the PR and between 8ca8990 and 45518b1.

⛔ Files ignored due to path filters (5)
  • docs/increments/active/2026-07-31-spring-modulith-package-refactor/plan.md is excluded by !docs/**
  • docs/specs/domains/secure-graph-rag.md is excluded by !docs/**
  • docs/specs/domains/secure-retrieval.md is excluded by !docs/**
  • docs/tests/domains/secure-graph-rag.md is excluded by !docs/**
  • docs/tests/domains/secure-retrieval.md is excluded by !docs/**
📒 Files selected for processing (10)
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeSearchAuthorizationService.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CitationContentServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolverTests.java
📝 Walkthrough

Walkthrough

The retrieval module now exposes adapter interfaces while moving default, JDBC, and evidence-scope implementations to package-private classes. API and Worker wiring use these contracts, and architecture tests enforce the approved dependency boundaries.

Changes

Retrieval boundaries

Layer / File(s) Summary
Contracts and visibility boundaries
core/src/main/java/com/orgmemory/core/knowledge/retrieval/*Service.java, *KnowledgeSearch.java, KnowledgeAssetAccessInspector.java, KnowledgeEvidenceScopeResolver.java
Retrieval services now expose interfaces. Asset inspection uses KnowledgeAssetAccessInspector, while the resolver is package-private.
Authorization and embedding adapters
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java, JdbcEmbeddingProfileRegistry.java
Default authorization-resource and JDBC embedding-profile implementations now provide the internal service behavior.
Canonical and GraphRAG retrieval
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java, DefaultGraphRagKnowledgeRetrievalService.java
Canonical and GraphRAG retrieval behavior moved into package-private default implementations. Configuration registers the concrete services.
Citation and source content
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java, DefaultSourceContentService.java
Citation and source opening retain authorization, auditing, storage, and integrity validation in default implementations.
Adapter wiring and verification
apps/api/..., apps/worker/..., core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java, ARCHITECTURE.md
API and Worker use approved retrieval contracts. ArchUnit and Modulith tests verify interface visibility and dependency allowlists.

Estimated code review effort: 4 (Complex) | ~60 minutes

Possibly related PRs

🚥 Pre-merge checks | ✅ 4 | ❌ 1

❌ Failed checks (1 warning)

Check name Status Explanation Resolution
Docstring Coverage ⚠️ Warning Docstring coverage is 2.53% which is insufficient. The required threshold is 80.00%. Write docstrings for the functions missing them to satisfy the coverage threshold.
✅ Passed checks (4 passed)
Check name Status Explanation
Title check ✅ Passed The title clearly identifies the main change: publishing retrieval adapter contracts.
Description check ✅ Passed The description covers the refactor, verification evidence, documentation checks, and release-scope decision, although it omits the template's Documentation impact heading.
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
✨ Finishing Touches 💡 1
📝 Generate docstrings 💡
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  • Commit on current branch
🧪 Generate unit tests (beta)
  • Create PR with unit tests
  • Commit unit tests in branch refactor/modulith-retrieval-adapter-boundaries

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This repository uses Tegami to manage releases. When your changes affect published packages, add a changelog file under .tegami/ before merging.

Create a changelog → · Changelog format

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Package Bump Version
orgmemory minor 0.1.10.2.0

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Actionable comments posted: 6

🤖 Prompt for all review comments with AI agents
Verify each finding against current code. Fix only still-valid issues, skip the
rest with a brief reason, keep changes minimal, and validate.

Inline comments:
In
`@core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java`:
- Around line 92-102: Update the catch block in
DefaultCanonicalHybridKnowledgeSearch to pass the caught
KnowledgeEvidenceScopeUnavailableException directly into
searchAuthorization.unavailable(...) when creating the mapped exception.
Preserve the existing actor, requestId, normalizedQuery, reasonCode, and
policyVersion arguments while retaining unavailable as the cause.

In
`@core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java`:
- Around line 93-100: Update the integrity-check failure path in
DefaultCitationContentService to record a DENY audit using the existing
SOURCE_BLOB_INTEGRITY_FAILED reason code before closing content and throwing
KnowledgeRetrievalUnavailableException. Adjust
CitationContentServiceTests.storageIntegrityMismatchClosesContentBeforeAllowAudit
to assert the expected DENY audit record instead of asserting that no audit was
recorded.

In
`@core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java`:
- Around line 611-637: Extract a private safeEmit helper in
DefaultGraphRagKnowledgeRetrievalService that accepts a
GraphRagEventSink.GraphRagEvent, calls events.emit, and suppresses
RuntimeException telemetry failures. Update emit, emitStage,
emitAssembledContext, emitPreparedStage, and emitSnapshotStage to build their
events and delegate through safeEmit, removing their duplicated try/catch
guards.
- Around line 386-389: Update the canonicalByChunk collector in
DefaultGraphRagKnowledgeRetrievalService to provide the same duplicate-key
handling as sameEvidence: retain the first SecureRetrievalCandidate when
multiple verified entries share a chunkId. Keep the existing key and value
mappings unchanged.

In
`@core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java`:
- Around line 35-56: Update the registration flow in
JdbcEmbeddingProfileRegistry to replace ON CONFLICT ... DO NOTHING with the
requested no-op UPSERT that updates embedding_profiles.profile_key and returns
the existing or inserted id. Capture that returned id and resolve the profile
through findByIdAndOrganizationId(...) instead of
findByOrganizationIdAndProfileKey(...), preserving the existing failure behavior
when resolution still fails.

In
`@core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java`:
- Around line 8-15: Move the relationship authorization check into
KnowledgeEvidenceScopeResolver.inspectAsset, including validating the requested
authorizationModelId and requiring relationship.state() to be
AccessState.ALLOWED before producing visibility evidence. Update
AdminPermissionController to stop performing the duplicated caller-side check
and rely on inspectAsset’s enforced authorization.
🪄 Autofix (Beta)

Fix all unresolved CodeRabbit comments on this PR:

  • Push a commit to this branch (recommended)
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ℹ️ Review info
⚙️ Run configuration

Configuration used: Path: .coderabbit.yaml

Review profile: ASSERTIVE

Plan: Pro Plus

Run ID: 661a539a-67ef-455e-ace4-e44c7f240dba

📥 Commits

Reviewing files that changed from the base of the PR and between 0b5b0cf and 8ca8990.

⛔ Files ignored due to path filters (6)
  • docs/increments/active/2026-07-31-spring-modulith-package-refactor/design.md is excluded by !docs/**
  • docs/increments/active/2026-07-31-spring-modulith-package-refactor/plan.md is excluded by !docs/**
  • docs/specs/domains/secure-graph-rag.md is excluded by !docs/**
  • docs/specs/domains/secure-retrieval.md is excluded by !docs/**
  • docs/tests/domains/secure-graph-rag.md is excluded by !docs/**
  • docs/tests/domains/secure-retrieval.md is excluded by !docs/**
📒 Files selected for processing (35)
  • ARCHITECTURE.md
  • apps/api/build.gradle.kts
  • apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java
  • apps/api/src/test/java/com/orgmemory/api/RetrievalAdapterBoundaryTests.java
  • apps/worker/build.gradle.kts
  • apps/worker/src/main/java/com/orgmemory/worker/OrgMemoryWorkerApplication.java
  • apps/worker/src/test/java/com/orgmemory/worker/RetrievalAdapterBoundaryTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorContentEditIntegrationTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorIdentityTrustIntegrationTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorPruningIntegrationTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorStagingIngestionIntegrationTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/ingestion/SourceIngestionPipelineIntegrationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/AuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultSourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/SourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/package-info.java
  • core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CitationContentServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistryTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/SourceContentServiceTests.java
📜 Review details
⏰ Context from checks skipped due to timeout. (2)
  • GitHub Check: Backend · Java 25
  • GitHub Check: Web · Node 24
🧰 Additional context used
📓 Path-based instructions (4)
**/*

📄 CodeRabbit inference engine (AGENTS.md)

**/*: Treat the repository and runtime evidence as the engineering system of record; do not treat chat or Northstar as authoritative.
Before changing a domain, read its specification, test-coverage document, and applicable decision filenames.
Material decisions about domain boundaries, authorization, persistence, publication, concurrency, cache isolation, parity scope, or deployment require an independent architecture challenge and documented alternatives before implementation.
Do not use completed increment documents as the source for current behavior; use them only for history or archaeology.
Before using unfamiliar Spring Boot, Spring Modulith, Spring AI, Gradle, React, Vite, Tailwind, TypeScript, Next.js, or Fumadocs APIs, consult current official documentation, Context7, and the relevant verification skill.
Read docs/guidelines/agent-safety.md before retrieval, AI, MCP, permission, upload, graph, or export work; never commit secrets or customer data.
Keep ddl-auto=validate and pair every persisted-model change with a Flyway migration.
Use the testing harness; a terminating clean test is the JVM context gate, and bootRun is not verification.

Files:

  • apps/worker/build.gradle.kts
  • apps/api/build.gradle.kts
  • apps/api/src/test/java/com/orgmemory/api/RetrievalAdapterBoundaryTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchConfiguration.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorStagingIngestionIntegrationTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/RetrievalAdapterBoundaryTests.java
  • ARCHITECTURE.md
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/package-info.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/SourceContentServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CitationContentServiceTests.java
  • apps/worker/src/main/java/com/orgmemory/worker/OrgMemoryWorkerApplication.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalService.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorPruningIntegrationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/SourceContentService.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorContentEditIntegrationTests.java
  • apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java
  • apps/worker/src/test/java/com/orgmemory/worker/ingestion/SourceIngestionPipelineIntegrationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java
  • core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/AuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistry.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorIdentityTrustIntegrationTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistryTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultSourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java
**/*.java

📄 CodeRabbit inference engine (AGENTS.md)

Apply IDE inspection only to edited backend Java files.

Files:

  • apps/api/src/test/java/com/orgmemory/api/RetrievalAdapterBoundaryTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchConfiguration.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorStagingIngestionIntegrationTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchTests.java
  • apps/worker/src/test/java/com/orgmemory/worker/RetrievalAdapterBoundaryTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/package-info.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/SourceContentServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/CitationContentServiceTests.java
  • apps/worker/src/main/java/com/orgmemory/worker/OrgMemoryWorkerApplication.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalService.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorPruningIntegrationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/SourceContentService.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorContentEditIntegrationTests.java
  • apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java
  • apps/worker/src/test/java/com/orgmemory/worker/ingestion/SourceIngestionPipelineIntegrationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java
  • core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/AuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistry.java
  • apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorIdentityTrustIntegrationTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalServiceTests.java
  • core/src/test/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistryTests.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultSourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java
core/src/main/java/com/orgmemory/core/{authorization,knowledge,permission}/**/*.java

⚙️ CodeRabbit configuration file

core/src/main/java/com/orgmemory/core/{authorization,knowledge,permission}/**/*.java: Treat PostgreSQL ACL evidence as canonical and OpenFGA as the relationship
authorization decision point. Authorization must fail closed. Filtering
must happen before ranking, LIMIT, graph traversal, answer generation,
export, and citation rendering. Flag metadata or timing leak paths.

Files:

  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/package-info.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/SourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalConfiguration.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/AuthorizationResourceDirectory.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistry.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultSourceContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/CitationContentService.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java
  • core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java
apps/api/src/main/java/**/*.java

⚙️ CodeRabbit configuration file

apps/api/src/main/java/**/*.java: Enforce the browser-BFF and resource-server boundaries. Authentication
must resolve an active internal actor through the explicit issuer and
subject binding. Reject identity, tenant, roles, or permissions supplied
by request payloads, JWT email, or untrusted JWT role claims.

Files:

  • apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java
🧠 Learnings (1)
📚 Learning: 2026-07-26T05:46:47.443Z
Learnt from: kl3inIT
Repo: kl3inIT/OrgMemory PR: 61
File: apps/mcp/src/main/java/com/orgmemory/mcp/McpSecurityConfiguration.java:50-52
Timestamp: 2026-07-26T05:46:47.443Z
Learning: In OrgMemory, treat the `apps/mcp` and `apps/api` as independent protocol adapter modules. When adjusting OAuth/wire-level scopes, do not introduce a shared Java constant or create a code dependency from `apps/mcp` to `apps/api` solely to deduplicate scope values. Instead, keep OAuth/scope constants adapter-local (e.g., in the relevant adapter/security configuration classes) and ensure cross-adapter consistency via automated realm/OAuth/authorization tests, rather than via shared wiring-level constants or cross-module references.

Applied to files:

  • apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java
🪛 ast-grep (0.45.0)
core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java

[warning] 53-53: Avoid user-generated class names for reflection
Context: Class.forName(implementation)
Note: [CWE-470] Use of Externally-Controlled Input to Select Classes or Code ('Unsafe Reflection').

(unsafe-reflection-java)

🪛 PMD (7.26.0)
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java

[Medium] 61-66: PreserveStackTrace (Best Practices): Thrown exception does not preserve the stack trace of exception 'denied' on all code paths

(PreserveStackTrace (Best Practices))

core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java

[Medium] 96-101: PreserveStackTrace (Best Practices): Thrown exception does not preserve the stack trace of exception 'unavailable' on all code paths

(PreserveStackTrace (Best Practices))

core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java

[Medium] 602-607: PreserveStackTrace (Best Practices): Thrown exception does not preserve the stack trace of exception 'unavailable' on all code paths

(PreserveStackTrace (Best Practices))

🔇 Additional comments (51)
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultGraphRagKnowledgeRetrievalService.java (15)

91-147: Null validation is applied only to events and tasks. Other collaborators are unchecked. Practical risk is low because construction happens through Spring configuration.


601-608: PMD flags the dropped cause. The same translation pattern exists in DefaultCanonicalHybridKnowledgeSearch, so it is an established convention, and searchAuthorization.unavailable has no visible cause-accepting overload. Not raising.


52-90: LGTM!


149-200: LGTM!


202-237: LGTM!


343-384: LGTM!


447-479: LGTM!


549-581: LGTM!


645-683: LGTM!


748-805: LGTM!


807-842: LGTM!


879-925: LGTM!


927-976: LGTM!


978-1026: LGTM!


516-544: 🩺 Stability & Availability

Manual verification needed: snapshot query timeouts

DefaultGraphRagKnowledgeRetrievalService waits on future.get() in queryPublishedSpaces, but the query path delegates vector, graph, and content reads to storage adapters. Confirm each adapter enforces timeout semantics before executePrepared returns and before the virtual-thread executor shutdown can complete.

core/src/test/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalServiceTests.java (1)

321-321: LGTM!

Also applies to: 944-944

core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCitationContentService.java (3)

22-39: LGTM!


101-155: LGTM!


53-70: 🩺 Stability & Availability

No change needed for verified.candidates().getFirst().

verify enforces non-empty inputs, rejects missing canonical chunks as not-visible before the OpenFGA check, and requires all OpenFGA decisions to succeed. It does not return an empty candidate list for authorized filtering.

			> Likely an incorrect or invalid review comment.
core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultSourceContentService.java (4)

16-34: LGTM!


61-81: LGTM!


82-136: LGTM!


44-52: 🔒 Security & Privacy

No change needed for resolve(actor, null) or the scope-unavailable path.

A null expected authorization model id does not bypass the relationship authorization check; model validation only runs when a non-null value is provided. This service path already fails closed and uses the domain KnowledgeResourceNotFoundException; the audit trail is out of scope for this service.

			> Likely an incorrect or invalid review comment.
core/src/test/java/com/orgmemory/core/knowledge/retrieval/CitationContentServiceTests.java (1)

180-180: LGTM!

core/src/test/java/com/orgmemory/core/knowledge/retrieval/SourceContentServiceTests.java (1)

45-46: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/AuthorizationResourceDirectory.java (1)

7-12: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/CitationContentService.java (1)

6-9: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistry.java (1)

6-18: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/SourceContentService.java (1)

6-9: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeAssetAccessInspector.java (1)

17-18: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/KnowledgeEvidenceScopeResolver.java (2)

176-176: LGTM!


34-35: 🩺 Stability & Availability

Ensure class-based transaction proxies for the scope resolver.

KnowledgeEvidenceScopeResolver is injected by both KnowledgeAssetAccessInspector and concrete KnowledgeEvidenceScopeResolver types, but its resolve(...) method is not declared on the interface. Add and cover a context test that uses the concrete type, or make resolve(...) part of the public adapter contract if those callers must go through the transactional proxy.

core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultAuthorizationResourceDirectory.java (1)

19-33: LGTM!

Also applies to: 35-61

core/src/main/java/com/orgmemory/core/knowledge/retrieval/JdbcEmbeddingProfileRegistry.java (1)

12-21: LGTM!

Also applies to: 66-88

core/src/test/java/com/orgmemory/core/knowledge/retrieval/EmbeddingProfileRegistryTests.java (1)

19-20: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearch.java (1)

5-6: 🩺 Stability & Availability

No change needed. PermissionAwareKnowledgeSearch is public and already declares search(...), so CanonicalHybridKnowledgeSearch and GraphRagKnowledgeRetrievalService expose their inherited API through a public contract.

core/src/main/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchConfiguration.java (1)

1-10: LGTM!

core/src/main/java/com/orgmemory/core/knowledge/retrieval/DefaultCanonicalHybridKnowledgeSearch.java (1)

1-91: LGTM!

Also applies to: 103-401

core/src/test/java/com/orgmemory/core/knowledge/retrieval/CanonicalHybridKnowledgeSearchTests.java (1)

76-76: LGTM!

Also applies to: 339-339

ARCHITECTURE.md (1)

172-177: LGTM!

apps/worker/src/main/java/com/orgmemory/worker/OrgMemoryWorkerApplication.java (1)

5-5: LGTM!

Also applies to: 54-54

apps/api/build.gradle.kts (1)

36-36: No change needed.

spring-modulith-starter-test already provides ArchUnit for these test compile classpaths via the declared module BOM.

apps/api/src/main/java/com/orgmemory/api/admin/AdminPermissionController.java (1)

17-17: LGTM!

Also applies to: 67-67, 76-76, 214-214

apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorContentEditIntegrationTests.java (1)

37-37: LGTM!

Also applies to: 92-92

apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorIdentityTrustIntegrationTests.java (1)

34-34: LGTM!

Also applies to: 88-88

apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorPruningIntegrationTests.java (1)

34-34: LGTM!

Also applies to: 85-85

apps/worker/src/test/java/com/orgmemory/worker/connector/ConnectorStagingIngestionIntegrationTests.java (1)

25-25: LGTM!

Also applies to: 80-80

apps/worker/src/test/java/com/orgmemory/worker/ingestion/SourceIngestionPipelineIntegrationTests.java (1)

36-36: LGTM!

Also applies to: 90-90

core/src/main/java/com/orgmemory/core/knowledge/retrieval/GraphRagKnowledgeRetrievalConfiguration.java (1)

3-3: LGTM!

Also applies to: 33-33

core/src/main/java/com/orgmemory/core/knowledge/retrieval/package-info.java (1)

11-17: LGTM!

core/src/test/java/com/orgmemory/core/ModulithVerificationTests.java (1)

10-20: LGTM!

Also applies to: 36-57, 800-808, 865-865, 915-915, 957-957

@kl3inIT
kl3inIT merged commit fa226b0 into main Aug 2, 2026
18 checks passed
@kl3inIT
kl3inIT deleted the refactor/modulith-retrieval-adapter-boundaries branch August 2, 2026 05:12
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