Update sphinx build#124
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commit 92be8de Merge: b3d65c8 9a6c40d Author: David Meyer <dihm@users.noreply.github.com> Date: Wed Dec 10 16:02:23 2025 -0500 Merge pull request #130 from dihm/readme_link Update readme example GUI link commit 9a6c40d Author: David Meyer <dihm.meyer@gmail.com> Date: Wed Dec 10 15:59:58 2025 -0500 Use a modern screenshot commit e181082 Author: David Meyer <dihm.meyer@gmail.com> Date: Wed Dec 10 15:51:57 2025 -0500 Update readme example GUI link commit b3d65c8 Merge: af528f1 c59c095 Author: David Meyer <dihm@users.noreply.github.com> Date: Wed Dec 10 15:44:27 2025 -0500 Merge pull request #127 from dihm/destar_imports Remove star imports from documentation commit af528f1 Merge: 663f87b 996a418 Author: David Meyer <dihm@users.noreply.github.com> Date: Tue Dec 9 15:44:15 2025 -0500 Merge pull request #128 from dihm/plot_window_restore Plot window geometry restore commit 996a418 Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Dec 8 15:05:28 2025 -0500 Add missing format specifier commit 08c6084 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Nov 21 11:03:06 2025 -0500 Allow for more than one plot window per analysis process. commit fd624b0 Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Nov 18 16:05:43 2025 -0500 Add ability for plot windows to remember their geometry between runs of lyse. Uses the `QSettings` functionality of Qt itself, with ini files created in lyse's `app_saved_config` directory. A new file for each analysis script is created. commit c59c095 Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Sep 29 10:37:38 2025 -0400 Remove star imports from documentation commit 663f87b Merge: 4eef798 5bd37cd Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Sep 26 10:31:18 2025 -0400 Merge pull request #126 from dihm/refactor3 Refactor mods commit 4eef798 Merge: de8eb4d f1e3dc7 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Sep 26 10:31:02 2025 -0400 Merge pull request #119 from spielman-group/refactor Initial refactoring commit 5bd37cd Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Sep 26 09:39:09 2025 -0400 Add basic docstrings to important module attributes so sphinx picks them up Also removes dead link to lyse.tempfile2clipboard in api/index commit 98c4ca2 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Sep 19 10:37:16 2025 -0400 Convert numpy imports to standard convention commit 79c9d25 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Sep 19 10:29:24 2025 -0400 Add `__all__` to the lyse API so old lyse star imports know `lyse.path` should be imported. commit de8eb4d Merge: df64c61 fcd0dc7 Author: David Meyer <dihm@users.noreply.github.com> Date: Tue Aug 19 17:22:28 2025 -0400 Merge pull request #125 from dihm/sphinx_updates Sphinx autosummary updates commit fcd0dc7 Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Aug 19 16:47:11 2025 -0400 Ensure intersphinx mapping does not include current project commit 23f6879 Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Aug 19 16:46:56 2025 -0400 Re-add autosummary template commit 0d1ad0e Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Aug 8 16:51:00 2025 -0400 Fix `spinning_top` and `_updated_data` to by proper lazy import commit c5349a0 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Aug 8 16:50:18 2025 -0400 Maintain backwards compat with lyse headless workflow, raises deprecation warning so we can drop it eventually though. commit 8692199 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Aug 8 16:49:30 2025 -0400 Rework `path` to be exposed as `lyse.path` instead of injected directly into namespace commit f1e3dc7 Merge: f1f703a df64c61 Author: Ian B. Spielman <54444522+ispielma@users.noreply.github.com> Date: Thu Aug 7 13:49:21 2025 -0400 Merge branch 'labscript-suite:master' into refactor commit f1f703a Author: spielman <spielman@umd.edu> Date: Thu Aug 7 13:39:27 2025 -0400 removed warning. before FutureWarning commit df64c61 Merge: 6ba461f 9da1665 Author: David Meyer <dihm@users.noreply.github.com> Date: Sun Aug 3 00:31:08 2025 -0400 Merge pull request #124 from dihm/sphinx_updates Update sphinx build and ensure RTD stable versioning is correct commit 9da1665 Author: David Meyer <dihm@users.noreply.github.com> Date: Sun Aug 3 00:24:36 2025 -0400 Bump sphinx pins and refresh RTD builds commit 5c59d75 Author: spielman <spielman@umd.edu> Date: Wed Jul 9 12:24:12 2025 -0400 Corrected spinning top reference. commit 074ee7d Merge: 40c270b 6ba461f Author: Ian B. Spielman <54444522+ispielma@users.noreply.github.com> Date: Tue Jul 8 16:58:11 2025 -0400 Merge branch 'labscript-suite:master' into refactor commit 40c270b Merge: 32c971e 7e5d3ed Author: Ian B. Spielman <54444522+ispielma@users.noreply.github.com> Date: Tue Jul 8 16:53:39 2025 -0400 Merge pull request #1 from dihm/refactor2 WIP: More disruptive refactor changes commit 7e5d3ed Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Apr 15 16:11:55 2025 -0400 Move path to script namespace injection, with backwards compatibility support for those who have (properly) imported it as `lyse.path` instead of `from lyse import *` commit 0aecf85 Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Apr 15 16:05:43 2025 -0400 Clean-up some unused imports commit 06ce8dc Author: David Meyer <dihm.meyer@gmail.com> Date: Tue Apr 15 15:45:13 2025 -0400 Move inter-process communications variables into `lyse.utils.worker` commit 4c7f596 Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Apr 14 14:37:26 2025 -0400 Move utilities into a sub-module. This divides common things from the worker utilities and the gui utilities. commit 32c971e Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Apr 14 14:04:46 2025 -0400 Ensure h5py is patched in filebox.py commit 2a3a1a4 Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Apr 14 12:08:50 2025 -0400 Relocate some imports in response to review commit 1fa549e Author: David Meyer <dihm.meyer@gmail.com> Date: Mon Apr 14 14:07:34 2025 -0400 Synchronize and add module level docstring headers. commit 7f8f04e Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Apr 11 15:31:26 2025 -0400 Correct license header filenames commit 6ba461f Merge: 2ff743f b4ae43b Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Apr 11 14:42:39 2025 -0400 Merge pull request #122 from dihm/workflow_refresh Workflow refresh commit b4ae43b Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Apr 11 14:08:02 2025 -0400 Bumpy pandas dependency to 1.5 to account for #108 fix commit c9d9fc3 Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Apr 11 14:07:31 2025 -0400 Update readme link, project metadata, and old dependencies commit d7508ab Author: David Meyer <dihm.meyer@gmail.com> Date: Fri Apr 11 14:06:57 2025 -0400 Update workflow to latest and greatest commit 2ff743f Merge: b272f50 d1090db Author: David Meyer <dihm@users.noreply.github.com> Date: Mon Mar 24 10:42:41 2025 -0400 Merge pull request #120 from dihm/metadata_overhaul Metadata overhaul commit d1090db Author: David Meyer <dihm.meyer@gmail.com> Date: Sat Jul 13 02:26:16 2024 -0400 Move all metadata to pyproject.toml, update setuptools-scm configs commit 5d93959 Author: Spielman Lab <ian.spielman@nist.gov> Date: Thu Mar 14 13:44:14 2024 -0400 Make sure that LABCONFIG is defined in all cases. Also remove unused import. commit b6755f7 Author: spielman <spielman@umd.edu> Date: Thu Mar 14 13:16:11 2024 -0400 _lyse_port and _labconfig were defined in __init__.py and used both there and in dataframe_utilities.py to avoid circular dependencies, I moved these into utis.py and renamed them LYSE_PORT and LABCONFIG respectivly to denote their role as system wide constants. I also moved LYSE_PATH there as well for consistency, but re-exported it in __init__.py so it will still be accessible when lyse is imported. commit bf739c9 Author: spielman <spielman@umd.edu> Date: Wed Mar 13 09:47:57 2024 -0400 Missing import in dataframe_utilities corrected. commit 839b47b Author: spielman <spielman@umd.edu> Date: Mon Mar 11 14:29:08 2024 -0400 Updated auto-generated docs. commit ace2835 Author: spielman <spielman@umd.edu> Date: Mon Mar 11 13:03:55 2024 -0400 Added lyse to `from lyse.dataframe_utilities import rangeindex_to_multiindex` commit 419694b Author: spielman <spielman@umd.edu> Date: Mon Mar 11 10:48:19 2024 -0400 Removed unused import and moved _rangeindex_to_multiindex into dataframe_utilities as rangeindex_to_multiindex. commit c174bfe Author: spielman <spielman@umd.edu> Date: Tue Mar 5 08:58:25 2024 -0500 Removed unused imports. commit a70d321 Author: spielman <spielman@umd.edu> Date: Tue Mar 5 08:52:01 2024 -0500 Fix menu bar application labels. commit 20eaddc Author: spielman <spielman@umd.edu> Date: Tue Mar 5 08:42:44 2024 -0500 Cleanup. commit a44eabc Author: spielman <spielman@umd.edu> Date: Mon Mar 4 09:07:16 2024 -0500 Changes based on feedback. commit 01327a0 Author: spielman <spielman@umd.edu> Date: Sun Mar 3 07:01:28 2024 -0500 Remove main.py commit 26a9d35 Author: spielman <spielman@umd.edu> Date: Sun Mar 3 06:52:07 2024 -0500 Moved the WebServer class into a new file called communication.py. There are some other places with interprocess / thread communication is defined and getting that together seems wise. This commit gets a place for it ready. commit b9b1243 Author: spielman <spielman@umd.edu> Date: Wed Feb 28 10:50:41 2024 -0500 refactored into smaller files. commit 3977887 Author: spielman <spielman@umd.edu> Date: Wed Feb 28 10:25:48 2024 -0500 Moved .ui files to a separate directory and refactored out supporting functions into utils.py commit de2fa99 Author: spielman <spielman@umd.edu> Date: Wed Feb 28 10:11:52 2024 -0500 Text cleanup. commit 4a3be1c Author: spielman <spielman@umd.edu> Date: Wed Feb 28 10:04:26 2024 -0500 Fixed import lyse.__main__ bug that opened a splash window and hung. commit 91cb71d Author: Spielman Lab <ian.spielman@nist.gov> Date: Fri Feb 23 16:55:57 2024 -0500 Refactored code working. commit d9b1f02 Author: spielman <spielman@umd.edu> Date: Fri Feb 23 12:35:15 2024 -0500 converting global variables to arguments. This is just good practice anyway. Refactor complete. commit d762040 Author: spielman <spielman@umd.edu> Date: Fri Feb 23 12:00:00 2024 -0500 Moved code from __main__.py into main.py so it can be imported elsewhere. commit b272f50 Merge: 50c5643 87bf031 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Feb 9 12:37:52 2024 -0500 Merge pull request #117 from dihm/setuptools_scm_fix Ensure setuptools_scm uses `release-branch-semver` commit 50c5643 Merge: 5b10958 e9108b3 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Feb 9 12:34:44 2024 -0500 Merge pull request #116 from dihm/update_workflow Update workflow pins to use node.js 20 commit e9108b3 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Feb 9 12:32:34 2024 -0500 Update workflow pins to use node.js 20 commit 87bf031 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Feb 9 12:29:53 2024 -0500 Ensure setuptools_scm uses `release-branch-semver` Also updates pins for setuptools and setuptools_scm in build. commit 5b10958 Merge: ed21e1c e402134 Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Feb 9 12:28:19 2024 -0500 Merge pull request #115 from ispielma/DocStringError Found some trivial errors in the lyse doc strings while looking at startup messages commit e402134 Author: spielman <spielman@umd.edu> Date: Fri Feb 9 11:00:58 2024 -0500 Found some trivial errors in the lyse doc strings while looking at the startup messages. commit ed21e1c Merge: d70dbb3 34e574d Author: David Meyer <dihm@users.noreply.github.com> Date: Wed Feb 7 10:06:52 2024 -0500 Merge pull request #113 from ispielma/UI_Fixes Added missing close event for pulldown menu. commit 34e574d Author: Spielman Lab <ian.spielman@nist.gov> Date: Tue Feb 6 12:12:49 2024 -0500 Corrected event. commit 751a6c3 Author: spielman <spielman@umd.edu> Date: Tue Feb 6 11:11:09 2024 -0500 Added missing close event for pulldown menu. commit d70dbb3 Merge: 9402ca7 94e341e Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Jan 19 15:05:10 2024 -0500 Merge pull request #112 from dihm/QT_deprecation Coerce float to int explicitly. commit 94e341e Author: David Meyer <dihm@users.noreply.github.com> Date: Fri Jan 19 15:02:05 2024 -0500 Coerce float to int explicitly. Needed for newer python's that don't do implicit conversion anymore. commit 9402ca7 Merge: 4674e8b c1f8417 Author: David Meyer <dihm@users.noreply.github.com> Date: Thu Jan 18 20:58:02 2024 -0500 Merge pull request #111 from dihm/rtd_build Modernize RTD build commit c1f8417 Author: David Meyer <dihm@users.noreply.github.com> Date: Thu Jan 18 20:52:09 2024 -0500 Modernize RTD build
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Bump sphinx pins and refresh RTD builds
See labscript-suite/labscript-suite#97 for details