feat: PHC-3861 add genomic ingestion commands#223
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cluebbehusen merged 4 commits intomasterfrom Jan 4, 2023
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Jan 4, 2023
| - `lo genomics ingestions create-foundation-bam` Creates a Foundation BAM ingestion | ||
| - `lo genomics ingestions create-caris-bam` Creates a Caris BAM ingestion | ||
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| ## [13.8.1] - 2022-07-25 |
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The changes below are backfilling
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🎉 This PR is included in version 13.9.0 🎉 The release is available on: Your semantic-release bot 📦🚀 |
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Adds the following commands for the
/genomic-ingestionAPI:lo genomics ingestions get <projectId> <ingestionId>: gets an ingestion based on idlo genomics ingestions list <projectId>: lists ingestions in a project, supports filters forname,failed, andsteplo genomics ingestions create-foundation <projectId> <xmlFileId> <reportFileId> [vcfFileId]: creates a Foundation ingestion for the supplied fileslo genomics ingestions create-caris <projectId> <tarFileId>: creates a Caris ingestion for the supplied TAR filelo genomics ingestions create-foundation-bam <projectId> <bamFileId>: creates a Foundation BAM ingestion for the supplied BAM filelo genomics ingestions create-caris-bam <projectId> <bamFileId>: creates a Caris BAM ingestion for the supplied BAM file