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Version 0.12.0
0.12.0 (19-12-24)
- add contrasts parameter to tools.marker_genes.run_deseq2
- tools.marker_genes.pairwise_rank_genes check minimum amount of groups
Changes to notebooks
- General: group_marker: set n_genes as top_n for get_rank_genes_tables
- ATAC 01 assembly: fix error when selecting the path_mtx (3rd) option (#326)
- General: prepare_for_cellxgene: set required mampok version to 3.0.5