dvir 3.2.1

New features

• Add file dvi-example.fam as a system file. Hence avoid internet download during example (gave CRAN error).
• New function dviSolve() implementing a complete pipeline for solving a DVI case.
• New function amDrivenDVI() implementing AM-driven analysis.
• New functions setPairing() and excludePairing() for manually fixing or disallowing certain pairings.
• In findUndisputed() replace argument relax with its negation strict, and reverse the default to be strict = FALSE.
• Harmonise the output summaries of the main functions.
• New function dviSim() for simulating marker data onto a DVI dataset.
• New function findNonidentifiable().
• Export (experimental) checkDVI().
• mergePM() gains argument verbose.

Other

• Enforce family names in consolidateDVI().
• Reorganise and synchronise code in findExcluded() and exclusionMatrix().
• Use cat() instead of message() throughout.
• Remove deprecated summariseDVI() (replaced by print.dviData()).

Bug fixes

• findUndisputed() miscounted steps if verbose = F.
• jointDVI() sometimes dropped victims after findUndisputed().