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pedbuildr now uses mirai for parallel likelihood computations in
reconstruct(), giving substantial speedups in many cases. Users can enable parallelisation by starting workers withmirai::daemons()before callingreconstruct(). See?reconstructfor details. -
The
numCoresargument has been deprecated, as parallelisation is now controlled through the mirai framework. -
More robust likelihood calculations. In particular, due to improved loop breaking in pedtools and pedprobr, many complex looped pedigrees that previously failed are now handled correctly.
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buildPeds()is significantly faster than before in the default case withlinearInb = 0, i.e., when mating between lineally related individuals is disallowed.