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pedmut 0.6.0

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@magnusdv magnusdv released this 13 Apr 14:08
· 72 commits to master since this release
v0.6.0
75a83f3

New features

  • Implement the PM stabilisation method of Simonsson & Mostad; liftover from Familias:::stabilize.

  • Implement more general lumping (multiple lumps!) under strong lumpability.

  • New utility getParams() for extracting model parameters.

  • Extend isStationary(), isReversible() and alwaysLumpable() to full models.

  • New functions isMutationMatrix() and isMutationModel().

  • New S3 method as.matrix() for classes mutationMatrix and mutationModel.

  • New function findStationary() for obtaining the stationary distribution of a mutation matrix.

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