Release v0.2.7

What's New

See individual changes below.

Features

• Adds better defaults depending on prior steps for assembly lists
• Adds missing maf-to-gvcf step
• "QoL" updates to example pipeline YAML file

Bug Fixes

• Fixes issues with FASTA file extensions in the Python scripts

Breaking Changes

• None

Installation

Download the appropriate archive for your system:

• seq_sim-v0.2.7.tar - Unix/Linux/macOS
• seq_sim-v0.2.7.zip - Windows

Quick Start

# Extract the archive
tar -xf seq_sim-v0.2.7.tar
# or
unzip seq_sim-v0.2.7.zip

# Run the application
./seq_sim-v0.2.7/bin/seq_sim --help

Requirements

• Java 21 or higher

Full Changelog

Full Changelog: v0.2.6...v0.2.7