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v0.0.13

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@github-actions github-actions released this 24 Mar 11:00
· 26 commits to main since this release

LineageCollapse v0.0.13

Breaking changes

  • Remove CairoMakie dependency and plotting capabilities, these should be handled by the end user and this simplifies the package.

Merged pull requests:

  • Visualization ext (#4) (@mashu)
  • test/test_visualization_ext.jl: Increase coverage. (#7) (@mashu)
  • fix cluster thresholding; replace xor trick (for now) (#8) (@mchernys)
  • Fix memory usage (#15) (@mashu)

Closed issues:

  • Example plot_diagnostics (#1)
  • LineageCollapse.jl logo (#2)
  • TagBot trigger issue (#3)
  • Informative error for plot_diagnostics when CairoMakie not loaded (#5)
  • Single group_id for v_call,j_call,cdr3_length,cluster (#6)
  • Fix XOR hamming distance calculation (#10)
  • Out of memory issue with many sequences (#14)