Skip to content

Latest commit

 

History

24 Commits

Folders and files

NameName
Last commit message
Last commit date
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

ACTOR: A latent dirichlet model to Compare expressed isoform proportions TO a Reference panel

Overview

actor is an R package which takes transcript expression as input and uses a latent Dirichlet model to compare to GTEx tissues. actor provides gene level similarities to the GTEx tissues and identifies collections of genes, or gene classes, which align similarly to GTEx tissues.

Installing ACTOR

ACTOR is available as an R package which can be installed using devtools as follows.

library(devtools)
devtools::install_github("mccabes292/actor")

Vignettes

A vignette for running your own analysis using actor is available here

About

No description, website, or topics provided.

Resources

Stars

5 stars

Watchers

1 watching

Forks

Releases

Packages

Contributors

Languages