Skip to content

v0.28.0

Choose a tag to compare

@d-laub d-laub released this 08 Jun 09:00
· 881 commits to main since this release

Feat

  • variants: numba allele-pack kernel + layout decomposition for non-canonical views
  • write: reject symbolic/breakend variants from SVAR inputs
  • write: reject symbolic/breakend variants from PGEN inputs
  • write: reject symbolic/breakend variants from VCF inputs
  • write: add consolidated unsupported-variant validator

Fix

  • variants: rc_() on sliced/reordered views via materialized copy
  • variants: to_packed() handles sliced/reordered alt/ref via numba kernel
  • open: default to variants when genotypes have no reference
  • write: validate VCF variants before creating output directory