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Rebuilt Patchwork around a library-first programmable model with CLI commands
as thin adapters.
Replaced patch sessions, baselines, stores, manifests, and target syntax with
the v0.2 paths: .patchwork/<pkg>@<version>/, patches/<pkg>@<version>.patch, and .dart_tool/patchwork/<pkg>@<version>/.
Added patchwork commit [pkg] and removed patchwork patch --commit.
Added patchwork undo <pkg> for safe removal of lock-owned pubspec_overrides.yaml entries and generated applied directories.
Added patchwork patch <pkg> [--continue [version]] for explicit patch
carry-forward across dependency upgrades.
Reworked patchwork.lock into a v2 lockfile with source sha256, patch.commit-sha256, and applied.patch-sha256 records.
Added patch history commit-sha256 records so --continue <version> can
safely reuse older patch files after a dependency upgrade.
Removed obsolete historical patch files when an unchanged fresh edit proves
the upgraded dependency source already contains the fix.
Added source records for hosted, custom hosted, path, and git dependencies.