This repository is no longer supported. The project was moved to: https://github.com/PangTree/PangTreeGUI
PangtreeVis is a web-browser tool. It enables direct calling PangtreeBuild but also loading the JSON file which is the result of calling PangtreeBuild.
- Dash Plotly, Dash Bootstrap Components, Dash Core Components, Dash Cytoscape, Dash Table, Dash Html Components
- Flask
- seaborn
- pangtreebuild
Firstly make sure the PangtreeBuild package is installed. Then run:
python3 setup.py install
python3 run.py
open in your web browser (tested in Chrome and Firefox): 127.0.0.1/8052
This software is developed with support of OPUS 11 scientific project of National Science Centre: Incorporating genomic variation information into DNA sequencing data analysis
This project is licensed under the MIT License - see the LICENSE.md file for details