Rename project to vsparse - #21
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Rename the package (src/vcsc -> src/vsparse), pyproject name, and all internal imports/doc references accordingly. VCSC/VCSR remain the names of the compressed-sparse layout itself (VCSCArray, VCSRArray, the "vcsc"/"ivcsc" on-disk format strings), only the distribution/import name changes. Also clarify in the README and docs that VCSCArray/VCSRArray are standalone array types usable without AnnData -- the AnnData integration (from_anndata, to_layer, VCSCAnnData) is optional. Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
The GitHub repo was renamed from meyer-lab/anndata-VCSC to meyer-lab/vsparse to match the package rename. Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
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Summary
vcsctovsparse(src/vcsc->src/vsparse,pyproject.tomlname, all internal imports, doc cross-references, anduv.lock).VCSCArray,VCSRArray,VCSCAnnData, and the"vcsc"/"ivcsc"on-disk format strings are unchanged) — only the distribution/import name changes.docs/usage.md/docs/index.mdthatVCSCArray/VCSRArrayare standalone array types that can be built from and used with plain SciPy sparse arrays, with no dependency on AnnData; the AnnData integration (from_anndata,to_layer,VCSCAnnData) is an optional layer on top.Test plan
uv run pytest— 761 passed, 37 skippeduv run ruff check .— passesuv run ty check— passesuv run sphinx-build -b html docs docs/_build/html— builds clean (only a pre-existing scipy intersphinx network-timeout warning)Note: the GitHub repository itself is still named
anndata-VCSC; renaming the repo/remote is a separate, more disruptive step not included here.🤖 Generated with Claude Code