v.0.24.1

Version 0.24.1 (27/9/2026)

• Add SHA-256 checksum integrity check (#20).
• Add polish flag in config.yaml.
• Remove unused rules.
• Minor bugs fixed.

v.0.23.1

Version 0.23.1 (5/9/2026)

• Fix issue (#17)
• Fix issue (#18)

v.0.22.2

Version 0.22.2 (31/7/2026)

• Fix issue (#15)

v.0.22.1

Version 0.22.1 (31/7/2026)

• Fix issue (#11)
• Fix issue (#12)
• Fix issue (#10)
• Add cleanup script.
• Add filtering DCS fasta.
• Add final assembly plots.

v.0.21.1

version 0.21.1 (25/6/2026)

• Fix java memory bug on BUSCO.
• Change default basecaller model.

v.0.20.2

Version 0.20.2 (12/6/2026)

• Minor benchmarking bugs fixed in qc.smk.

v.0.20.1

Version 0.20.1 (12/6/2026)

• Command benchmark: added to every rule.smk to capture resources.
• Banner logo added.
• Success and error warning message added.
• correct multiQC formatting issues.
• Minor bugs fixed.

v.0.19.1

Version 0.19.1 (7/6/2026)

• Fix issue (#8)

v.0.18.1

Version 0.18.1 (1/6/2026)

• Old rm_haplotigs.smk removed.
• Fixed automatic coverage cutoff computation.
• Formatting issues fixed.
• Fixed medaka version in conda env.