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Releases: milnus/Corekaburra

0.1.0

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@milnus milnus released this 10 Apr 09:04
0e93461

Major change:

  • Allow raw Bakta gff files and corrected gff files from Panaroo

Minor changes:

  • remove some repeat code chuncks
  • simplify parts of code
  • Update github workflows

JOSS publication tag

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@milnus milnus released this 21 Nov 23:46
640244d

This version has passed review at JOSS

Joss submission release

Pre-release

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@milnus milnus released this 16 Oct 23:15
bdb0167
  • Included paper
  • Improved README
  • Improved handling of complete multi chromosome genomes

Pre-publish release

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@milnus milnus released this 22 Jun 19:44
4109c20

This release contain less code due to redundancies made by Panaroo improvements.
It also includes more tests and improved speed and function in identifying segments of core genes across genomes.

Initial bug fixes

Initial bug fixes Pre-release
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@milnus milnus released this 26 Jan 04:54
ac96c30
  • Added version flag in command line
  • Improve handling of refound genes that occur in fragmented genes
  • Add function to handle core graphs that form multiple components

Soft release

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@milnus milnus released this 11 Jan 02:10
99b075c

This is the first release of Corekaburra.
It includes a working but not fully tested code.
This version is therefor runnable, but may not produce truely trustfull results.