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Releases: miniscope/minisim

v1.0.3 Notebook display bug fixes

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@daharoni daharoni released this 24 Jun 06:55
a76a5d4

What's Changed

  • fix(notebooks): play() emits even (h,w) so video plays in JupyterLab by @daharoni in #29
  • fix(notebooks): render dashboards & panels correctly in browser JupyterLab by @daharoni in #30

Full Changelog: v1.0.2...v1.0.3

v1.0.2

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@daharoni daharoni released this 20 Jun 19:49
e638f0f

What's Changed

  • feat(presets): flesh out V4 scope + region forward model; make Scope/Region pydantic by @daharoni in #27

Full Changelog: v1.0.1...v1.0.2

v1.0.1

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@daharoni daharoni released this 18 Jun 07:40
e6e7fe0

What's Changed

  • feat(recording): add Recording.observed_movie by @daharoni in #25
  • style: apply ruff format across minisim and enforce it by @daharoni in #26

Full Changelog: v1.0.0...v1.0.1

v1.0.0

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@daharoni daharoni released this 18 Jun 06:01
18ac3f6

What's Changed

  • Harden the scoring contract + lock reproducibility by @daharoni in #14
  • Tighten morphology type + trim the top-level surface by @daharoni in #15
  • Add "auto" exposure (photons_per_unit="auto") by @daharoni in #16
  • Wire format_version into load(); make the spec hash advisory by @daharoni in #17
  • Remove auto-exposure; manual fixed exposure with good defaults by @daharoni in #19
  • Redesign evaluation metrics + add metrics teaching notebook by @daharoni in #20
  • Notebook 2: cross-talk and demixing capstone by @daharoni in #21
  • SNR-only detectability + metrics-notebook (03) rework by @daharoni in #22
  • fix(notebooks): de-gate NB01 SNR panels + repair order_steps import by @daharoni in #23
  • docs(notebooks): NB02 demixing review pass by @daharoni in #24

Full Changelog: v0.4.1...v1.0.0

v0.4.1

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@daharoni daharoni released this 15 Jun 19:08
648aa77

What's Changed

  • feat(testing): minisim.testing fixtures + scorer, and a documentation honesty pass by @daharoni in #13

Full Changelog: v0.4.0...v0.4.1

v0.4.0

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@daharoni daharoni released this 15 Jun 17:28
532ae0a

What's Changed

  • Add scope/region presets and switch to an optical-center coordinate frame by @daharoni in #11
  • docs(sweep): focus x separation ROI-crosstalk worked example by @daharoni in #12

Full Changelog: v0.3.0...v0.4.0

v0.3.0 Added vasculature and an interactive builder notebook

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@daharoni daharoni released this 10 Jun 07:27
292c712

What's Changed

  • feat: vasculature + branched dendrites (and anatomy-notebook stage) by @daharoni in #9
  • feat(studio): interactive build_recording data-generation notebook by @daharoni in #10

Full Changelog: v0.2.0...v0.3.0

v0.2.0

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@daharoni daharoni released this 09 Jun 01:00
24d558c

What's Changed

  • docs: add Sphinx/MyST documentation site on Read the Docs by @daharoni in #1
  • feat(notebooks): ship notebooks via minisim-notebooks; harden packaging by @daharoni in #2
  • feat(place_neurons): multi-population + explicit positions; rename render -> composite by @daharoni in #3
  • docs: "minimal to full" examples ladder with figures by @daharoni in #4
  • Consolidate notebook-reimplemented physics into the library by @daharoni in #5
  • feat(spec): canonical step order - listing order no longer matters by @daharoni in #6
  • perf: faster forward render + PerfTracker + opencv video writer by @daharoni in #7
  • feat(notebooks): list/copy subcommands for the minisim-notebooks CLI by @daharoni in #8

New Contributors

Full Changelog: v0.1.0...v0.2.0