Skip to content

Dashboard Page

Mouse Connectome Project edited this page Apr 30, 2019 · 20 revisions

Dashboard Page


Searching


Global Text Search

Global Search helps you to filter your table data based on different categories like Injection Site, Tracers, Case Ids. You can select any category from the dropdown and type in some text that matches the selected category with the help of auto complete drop down.
Select a brain region to see a list of cases in which a tracer injection has been made in that location, e.g., Anterior Cingulate Cortical Area (ACA). Search can be performed by the full name or the acronym of the brain region according to the Allen Reference Atlas.
or select tracer for region of interest,


Below is demo for switching categories while searching. When Injection Sites category is selected, user can feel free to type in the site acronym or full-name and still be able to filter the table content seamlessly. When typing, use the suggestions for quick access of required information.

global_search

Viz Search

Anterograde tracers injected into a region of interest label the region's output projections. These tracers label axons and their terminal branches. Choose anterograde if you would like to view cases with anterograde tracers in your region of interest that show its output projections.

Retrograde tracers injected into a region of interest label all brain structures that provide input to the region. These tracers label the cell bodies of projection neurons that send inputs to the region of interest. Choose retrograde if you would like to view cases with retrograde tracers in your region of interest that show its input connections.


Filters

Project (# of cases)

Select the name of a project to get a list of its associated cases. For example, choosing Hippocampus will return all tracer injection cases that were used to assess the connectivity architecture of the hippocampus.

Gene expression

For select brain regions, in addition to connectivity information, gene expression data also is available through our collaborations with UCSD. The areas for which gene expression data is also available are indicated with the "insert symbol" symbol. Gene expression data for the region can be attained by clicking on "insert symbol".


Table

Content comes here...

Navigating to viewers

Content comes here...

Miscellaneous

Content comes here...

Clone this wiki locally