Dashboard Page
Global Search helps you to filter your table data based on different categories like Injection Site, Tracers, Case Ids. You can select any category from the dropdown and type in some text that matches the selected category with the help of auto complete drop down.
Select a brain region to see a list of cases in which a tracer injection has been made in that location, e.g., Anterior Cingulate Cortical Area (ACA). Search can be performed by the full name or the acronym of the brain region according to the Allen Reference Atlas.
or select tracer for region of interest,
Anterograde tracers injected into a region of interest label the region's output projections. These tracers label axons and their terminal branches. Choose anterograde if you would like to view cases with anterograde tracers in your region of interest that show its output projections.
Retrograde tracers injected into a region of interest label all brain structures that provide input to the region. These tracers label the cell bodies of projection neurons that send inputs to the region of interest. Choose retrograde if you would like to view cases with retrograde tracers in your region of interest that show its input connections.
Select the name of a project to get a list of its associated cases. For example, choosing Hippocampus will return all tracer injection cases that were used to assess the connectivity architecture of the hippocampus.
For select brain regions, in addition to connectivity information, gene expression data also is available through our collaborations with UCSD. The areas for which gene expression data is also available are indicated with the "insert symbol" symbol. Gene expression data for the region can be attained by clicking on "insert symbol".
- iConnectome cases
- iConnectome map cases
- Cases available for gene expression data on UCSD web portal
Below is demo for switching categories while searching. When Injection Sites category is selected, user can feel free to type in the site acronym or full-name and still be able to filter the table content seamlessly. When typing, use the suggestions for quick access of required information.
- Case ID
- Injection Site, Tracer, and ARA levels
- Projects and navigation buttons
- Image gallery
- iConnectome Viewer
- iConnectome Map Viewer
- Total number of cases
- Number of injection sites
- Number of pathways
- Number of cases available on iConnectome Viewer
- Number of cases available on iConnectome Map Viewer
- Number of cases which injection sites are available for the gene expression data at UCSD site