module.classifier

Classifier Package

Modules in the biolockj.module.classifier package categorize micbrobial samples into Operational Taxonomic Units (OTUs) either by reference or with clustering algorithms.

This package contains 2 sub-packages:

1. module.classifier.r16s contains modules designed to classify 16S data.
2. module.classifier.wgs contains modules designed to classify whole genome sequence data.

Modules in these sub-packages extend the ClassifierModuleImpl class.

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ClassifierModuleImpl

Description: Abstract implementation of the ClassifierModule interface that the other classifier modules extend to inherit standard functionality.
Abstract modules cannot be included in the pipeline run order.

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