Release/1.3.1#798
Merged
gongyixiao merged 165 commits intomasterfrom May 16, 2020
Merged
Conversation
* Upgrade delly to 0.8.2 and create new Docker containing bcftools and delly together to remove burden from Delly-Manta merging steps * added ps to Docker file and soft-linked delly to /usr/bin * fixed hard-coded reference to delly location, reverted softlink to delly to /usr/local/bin as this was in PATH all along * moved up output of delly in DAG to avoid nextflow failure * fixed publishing of delly calls into results folder * removed originally delly container and insured publish of delly files * including auxiliary Docker files such as ._Dockerfile * removed ._Dockerfile files Co-authored-by: gongyixiao <5620765+gongyixiao@users.noreply.github.com> Co-authored-by: Anne Marie Noronha <noronhaa@mskcc.org>
…to feature/watchPath
…lter parameterize LOHHLA minCoverageFilter
Feature/anonymize fastq
Add wall time tiers and more wall time exit code
Feature/megatron list update
Feature/qc result reorganize
prep 1.3.1 release in develop
anoronh4
approved these changes
May 16, 2020
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
3 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Uh oh!
There was an error while loading. Please reload this page.