Automation: Generate both global and wa-state phylogenetic trees#54
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Automation: Generate both global and wa-state phylogenetic trees#54
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…wa) builds This is a prerequisite to automating both global and washington state builds so that they do not overwrite to the same files.
Added a `phylogenetic_wa` GitHub Action in order to support building both global and Washington state phylogenetic trees. Since both define custom_rules, which would overwrite each other, we defined a config-public.yaml that combines deploy-related and Washington state-specific custom rules, merging them into a unified array. For the Washington state build, the public-facing configuration required additional overrides to access data from the public site, as opposed to the original configuration, which relied on privately processed ingest.
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Description of proposed changes
During automated building, kick off both global and wa (washington-state) phylogenetic trees.
Main changes include:
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