Snorlax is a Pokémon whose body is composed of mostly its belly. It wakes up only to eat, requiring about 400 kg of food per day before returning to its slumber, although it can also eat while it is resting. A Poké Flute is one of the few things that can awaken Snorlax from its slumber. Snorlax is docile enough to let children and small Pokémon bounce on its large stomach. A lot of Pokémon tend to gather around Snorlax to sleep near it or on it.
What's Changed
Added
- #84 by @JudithBernett
- Added support for flexible input to the baseline models. Better supported in the Python package drevalpy for now; modifying the input would require a local version of the package.
- Therefore, the ProteomicsElasticNet, ProteomicsRandomForest, the SingleDrugProteomicsElasticNet, SingleDrugProteomicsRandomForest and the ChemBERTaNeuralNetwork models are now deprecated because they are just an ElasticNet, RandomForest, and SimpleNeuralNetwork with another input modality.
Changed
- #83 Important! Template update for nf-core/tools v4.0.2 by @nf-core-bot and @nictru
- #84 by @JudithBernett
- The MultiOmics(NeuralNetwork|RandomForest) have now been renamed to MultiView(NeuralNetwork|RandomForest) because they support flexible input now.
- Support for new baseline models: AdaBoostDecisionTree, Lasso, MultiViewXGBoost, KNNRegressor
- Support for new models: PharmaFormer, Precily
- Updated the summary image to include the new models
- Changed to new CLI syntax for drevalpy with subcommands instead of single commands
Fixed
- #87 by @JudithBernett Fixed wrong singularity image hash
Dependencies
| Dependency | Old version | New version |
|---|---|---|
| drevalpy | 1.4.1 | 1.5.0 |
| scikit-learn | 1.8.0 | 1.9.0 |
New contributors
Full Changelog: 1.2.0...1.2.1
Contributors
JudithBernett, nf-core-bot, and nictru