Pyrodigal - add --jobs flag for multi-threaded operation, bump version

[prototaxites]

Since the module was created, Pyrodigal has received a --jobs flag to split the computation across threads - the Pyrodigal version has already been updated to support this but the module script is missing the option.

Edit: also bump Pyrodigal version

PR checklist

Closes #XXX

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the module conventions in the contribution docs
• If necessary, include test data in your PR.
• Remove all TODO statements.
• Emit the versions.yml file.
• Follow the naming conventions.
• Follow the parameters requirements.
• Follow the input/output options guidelines.
• Add a resource label
• Use BioConda and BioContainers if possible to fulfil software requirements.
• Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
  • For modules:
    • nf-core modules test <MODULE> --profile docker
    • nf-core modules test <MODULE> --profile singularity
    • nf-core modules test <MODULE> --profile conda
  • For subworkflows:
    • nf-core subworkflows test <SUBWORKFLOW> --profile docker
    • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
    • nf-core subworkflows test <SUBWORKFLOW> --profile conda

[jasmezz]

Once this PR with a pyrodigal version update is merged, we can update the nf-core module, either here or in a separate PR.

[prototaxites]

Sorted ✔️

[jasmezz]

Thanks for including the version update as well. LGTM!