Update mitohifi container and switch to nf-test

[prototaxites]

Updates mitohifi container to new build without conda defaults channel. Bump to nf-test because why not :)

PR checklist

Closes #XXX

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the module conventions in the contribution docs
• If necessary, include test data in your PR.
• Remove all TODO statements.
• Emit the versions.yml file.
• Follow the naming conventions.
• Follow the parameters requirements.
• Follow the input/output options guidelines.
• Add a resource label
• Use BioConda and BioContainers if possible to fulfil software requirements.
• Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
  • For modules:
    • nf-core modules test <MODULE> --profile docker
    • nf-core modules test <MODULE> --profile singularity
    • nf-core modules test <MODULE> --profile conda
  • For subworkflows:
    • nf-core subworkflows test <SUBWORKFLOW> --profile docker
    • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
    • nf-core subworkflows test <SUBWORKFLOW> --profile conda

[prototaxites]

Getting the below linting errors. Not sure if need to be fixed or can be ignored - discussion on Slack suggests the latter maybe?

https://nfcore.slack.com/archives/CE6PELWR4/p1725867108827219

╭─ [!] 2 Module Test Warnings ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╮
│                    ╷                                           ╷                                                                                                                             │
│ Module name        │ File path                                 │ Test message                                                                                                                │
│╶───────────────────┼───────────────────────────────────────────┼────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╴│
│ mitohifi/mitohifi  │ modules/nf-core/mitohifi/mitohifi/main.nf │ Unable to connect to container registry, code:  405, url: https://ghcr.io/marcelauliano/mitohifi:3.2.3                      │
│ mitohifi/mitohifi  │ modules/nf-core/mitohifi/mitohifi/main.nf │ Container versions do not match                                                                                             │
│                    ╵                                           ╵                                                                                                                             │
╰──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╯

[prototaxites]

Looks like the version number internally to mitohifi has not been bumped with the new release - have switched out to use a fixed version number for now.

[SPPearce]

Can you add stubs and stub tests please.

[prototaxites]

Done - looks like it's ready to go unless anything else needs changed?

[SPPearce]

Yes, looks good to me, thanks for adding nf-test and the snapshots :)