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Multisample support for spatialxe runs#102

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khersameesh24 merged 12 commits into
nf-core:devfrom
khersameesh24:dev
Sep 30, 2025
Merged

Multisample support for spatialxe runs#102
khersameesh24 merged 12 commits into
nf-core:devfrom
khersameesh24:dev

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@khersameesh24 khersameesh24 commented Sep 23, 2025

This one needs a thorough review

Comment thread modules/local/proseg/preset/main.nf
Comment thread modules/local/proseg/proseg2baysor/main.nf Outdated
Comment thread modules/local/resolift/main.nf Outdated
Comment thread modules/local/segger/create_dataset/main.nf Outdated
Comment thread modules/local/segger/predict/main.nf Outdated
Comment thread modules/local/spatialdata/merge/main.nf
Comment thread modules/local/spatialdata/meta/main.nf Outdated
Comment thread workflows/spatialxe.nf
Comment thread workflows/spatialxe.nf
Comment thread conf/modules.config
Comment thread modules/local/baysor/create_dataset/main.nf Outdated
Comment thread modules/local/baysor/preprocess/main.nf Outdated
Comment thread workflows/spatialxe.nf
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LGTM

@khersameesh24 khersameesh24 merged commit 0cb2f69 into nf-core:dev Sep 30, 2025
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3 participants