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mg7 v1.0.0-M4

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@laughedelic laughedelic released this 03 Jun 21:01
· 231 commits to master since this release

This milestone adds some important features and improves the output data presentation. Here are the main changes since the v1.0-M3 release:

  • New features:
    • #65: Added average pident (percentage of identity) column to the assignment and counts tables
    • #66: Combining multiple reference DBs
    • #68: Assignment now can handle multiple taxas per reference sequence
    • #72: BBH is now evaluated as the lowest common ancestor of the most rank-specific nodes of the max-bitscore hits
    • #70: Replaced db.rnacentral library dependency with the ReferenceDB class
  • Various output tables improvements:
    • #69: Moved lineage column to the 1st position
    • #74: Added rank number for ordering rows by rank
    • #75, #76: Changed frequency counts to percentage (i.e. 100-based)

See the full list of pull requests merged in this release in the v1.0-M4 milestone.