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    • kymflow

      Public
      Blood flow analysis from line scans
      Python
      GNU General Public License v3.0
      0060Updated Apr 15, 2026Apr 15, 2026
    • A collection of nicegui widgets
      Python
      GNU General Public License v3.0
      0000Updated Apr 14, 2026Apr 14, 2026
    • picalapse

      Public
      Headless Raspberry Pi timelapse camera controller built on Picamera2/libcamera.
      Python
      0000Updated Dec 18, 2025Dec 18, 2025
    • Documentation for Map Manager - Igor
      HTML
      GNU General Public License v3.0
      0100Updated Oct 4, 2025Oct 4, 2025
    • CSS
      0000Updated Oct 4, 2025Oct 4, 2025
    • A Python library with the core functionality of MapManager
      Python
      00130Updated Sep 16, 2025Sep 16, 2025
    • TypeScript
      0240Updated Sep 16, 2025Sep 16, 2025
    • Path-finding algorithms to find the brightest path between points in an image.
      Python
      GNU General Public License v3.0
      5311Updated Sep 12, 2025Sep 12, 2025
    • Longitudinal image analysis with online editing and sharing.
      Python
      GNU General Public License v3.0
      1151Updated Aug 31, 2025Aug 31, 2025
    • Python
      GNU General Public License v3.0
      0000Updated Apr 22, 2025Apr 22, 2025
    • SparkMaster 2 software for the analysis of Ca sparks
      Python
      GNU General Public License v3.0
      1000Updated Mar 24, 2025Mar 24, 2025
    • bioio

      Public
      Image reading, metadata management, and image writing for Microscopy images in Python
      Python
      BSD 3-Clause "New" or "Revised" License
      9010Updated Feb 15, 2025Feb 15, 2025
    • Python
      GNU General Public License v3.0
      1681Updated Jun 12, 2024Jun 12, 2024
    • A Napari plugin to perform brightest path tracing.
      Python
      GNU General Public License v3.0
      2791Updated Feb 13, 2024Feb 13, 2024
    • .github

      Public
      0000Updated Dec 23, 2022Dec 23, 2022
    • Python
      GNU General Public License v3.0
      0100Updated Nov 19, 2022Nov 19, 2022
    • Oligo analysis by searching for oligo dapi nuclei using cellpose
      Python
      BSD 3-Clause "New" or "Revised" License
      0000Updated Nov 12, 2022Nov 12, 2022
    • 0000Updated Nov 6, 2022Nov 6, 2022
    • Tracing

      Public
      Tracing filament like structures in 3D image volumes
      Python
      GNU General Public License v3.0
      0000Updated Oct 22, 2022Oct 22, 2022
    • Canvas

      Public
      An on the scope canvas combining video and scanning light paths
      Python
      0000Updated Sep 7, 2022Sep 7, 2022
    • Example data to run a local PyMapManager server
      MIT License
      1100Updated Mar 26, 2022Mar 26, 2022
    • A napari plugin for PyMapManager
      Python
      GNU General Public License v3.0
      0001Updated Mar 5, 2022Mar 5, 2022
    • Map Manager is software to annotate and analyze image volume time-series.
      0100Updated Feb 20, 2020Feb 20, 2020
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