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1.3.0

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@apetkau apetkau released this 19 Feb 20:57
· 34 commits to main since this release
1.3.0
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apetkau Aaron Petkau
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Learn about vigilant mode.
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Learn about vigilant mode.

1.3.0 - 2024-02-19

Added

  • --provider parameter to be used to pick where to fetch data from and with what tool in PR #21.
    • --provider SRA fetches data from the Sequence Read Archive
    • --provider ENA fetches data from the European Nucleotide Archive

Changed

  • Updated nf-test snapshots and added new tests for --provider feature in PR #21.
  • Updated nextflow_schema.json with the --provider parameter in PR #21.
  • Updated dependency fasterq-dump to version 3.0.8 so that fasterq-dump can handle SRA Lite files in addition to SRA files in PR #23.
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